Lacunisphaera limnophila: Verru16b_00157
Help
Entry
Verru16b_00157 CDS
T04567
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Verru16b_00157 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obg03019
]
Verru16b_00157 (recQ_1)
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_00157 (recQ_1)
Enzymes [BR:
obg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Verru16b_00157 (recQ_1)
Messenger RNA biogenesis [BR:
obg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Verru16b_00157 (recQ_1)
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Verru16b_00157 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOS43116
UniProt:
A0A1I7PHM8
LinkDB
All DBs
Position
179447..181276
Genome browser
AA seq
609 aa
AA seq
DB search
MDDLLLTLKTTFGYASFHPLQREIIETSLDGRDVFALLPTGGGKSLCFQLPALHRPGLTI
VVSPLIALMKDQVDQLQAAGVAATFLNSSLDADESRSRLRGLHRGEFRLLYVAPERLLLD
NWQENLKAWNIAALAIDEAHCVSEWGHDFRPEYRQIAKLRDFLPDVPVMALTATATDRVR
ADIVKQLKLRDPATFVASFNRPNLSYKVIPKDQPAKQIINFVRTREHESGIIYCASRATA
ERVAESLAGRGFLARPYHAGLDAAERSRNQELFLRDECRIICATIAFGMGINKPNVRWVI
HHDLPKNIEGYYQETGRAGRDGLPGDCLLLFSAGDIAKQTHFLAEITDEHEQAVARAQLR
QIVHYAESAGCRRAELLYYFGEKFPLDNCGACDNCLEPRETYDGTVVAQKFLSCVYRIAQ
NSNFSVGLNHIIEVLTGADTEKITRWGHDRLTTYGIGRDLPRPAWAAIGRELMRLGYLTV
AEGEFATLELTPEGREVLRSRAPITLTKPMDLPKAKRVTRREGDIACDEILFEALRALRK
RLADDRKVPAYVIFGDATLREMARRYPTRVSEMDGITGVGEKKRAEFGAIFAEAVSAYLQ
TNSKIQFND
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggacgatcttctcctcaccctcaaaaccaccttcgggtacgccagcttccacccgttg
cagcgcgagatcatcgaaacctccctcgacgggcgcgatgtcttcgccctcctgcccacc
ggcggcggcaaatccctctgcttccagctgcccgccctgcaccgccccggcctgaccatc
gtcgtctcgccgctcatcgccctgatgaaggaccaggtcgaccagctccaggccgccggc
gtcgccgccaccttcctcaattcctccctcgatgccgacgagtcccgctcccgccttcgc
gggctccaccgcggcgagttccgcttgctctacgtcgcgcccgagcgcctcctcctcgac
aactggcaggagaacctgaaggcctggaacatcgccgcgctcgccatcgacgaggcccac
tgtgtctccgaatggggccacgacttccgccccgagtaccgccagatcgccaagctccgc
gacttcctgcccgacgtcccggtcatggccctcaccgccaccgcgaccgaccgtgtgcgc
gccgatatcgtcaagcagctcaagctccgcgacccggccaccttcgtcgccagcttcaac
cgccccaacctctcctacaaggtcatccccaaggaccagcccgcgaagcagatcatcaat
tttgtccgcacccgcgagcacgagagcggcatcatctactgcgccagccgcgccaccgcc
gagcgcgtggccgagtccctcgccggccgcggcttcctcgcgcgcccctaccacgccggc
ctagacgccgccgagcgctcccgcaaccaggagctcttcctccgcgacgagtgccgcatc
atctgcgcgaccatcgcgttcggcatgggcatcaacaagcccaacgtccgctgggtcatc
caccacgacctgcccaagaacatcgagggctactaccaggaaaccggccgcgccgggcgc
gatggcctgcccggggactgcctgctgctcttcagcgccggcgacatcgccaagcagacc
cacttcctcgccgaaatcaccgacgagcacgagcaggccgtcgcccgcgcccagctccgc
cagatcgtgcactacgccgagagcgccggctgccgccgcgccgagctgctgtactacttc
ggcgagaaattccccctcgataattgcggcgcctgcgacaactgcctcgagccccgcgag
acctacgacggcaccgttgtcgcccagaagttcctctcctgcgtctaccgcatcgcgcaa
aattccaatttcagcgtcggcctgaaccatatcatcgaggtcctcaccggcgccgacacc
gagaagatcacccgctggggccacgaccgcctcaccacctacggcatcggccgcgacctc
ccccgcccggcctgggccgccatcggccgcgagctgatgcgcctcggctacctcaccgtc
gccgagggcgagttcgccacgctcgaactcacacccgaaggccgcgaggtgctccgctcc
cgcgcccccatcacactcaccaagcccatggacctgcccaaggcgaagcgcgtcacccgc
cgcgagggcgacatcgcctgcgacgagatcctcttcgaggccctccgcgccctgcgcaag
cgcctcgccgacgatcgcaaggtccccgcctacgtcatctttggcgacgccaccctccgc
gagatggcccgccgctacccgacccgcgtcagcgagatggacggcatcactggtgtcggc
gaaaagaagcgcgccgagttcggggcgatcttcgccgaggccgtgtccgcctacctccag
accaattccaagatccagttcaacgactga
DBGET
integrated database retrieval system
