Lacunisphaera limnophila: Verru16b_00806
Help
Entry
Verru16b_00806 CDS
T04567
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg00300
Lysine biosynthesis
obg00470
D-Amino acid metabolism
obg01100
Metabolic pathways
obg01110
Biosynthesis of secondary metabolites
obg01120
Microbial metabolism in diverse environments
obg01230
Biosynthesis of amino acids
Module
obg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Verru16b_00806 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Verru16b_00806 (lysA)
Enzymes [BR:
obg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Verru16b_00806 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOS43751
UniProt:
A0A1D8AS81
LinkDB
All DBs
Position
complement(982521..983828)
Genome browser
AA seq
435 aa
AA seq
DB search
MHHFHYAGQKLHCESVDLAAIAQLHGTPTYVYSAQTIADNYRRLASSLTGLDLQICYAMK
ANSNLAVLRHFANLGAAFDLVSGGELRRVAAAGGDTTRSVFAGVGKSEAEIRLALETGVF
GFHVESEPELARINHVAGQLGRKAPIAIRINPDVDAKTHAKITTGKSDNKFGIPLKHAAA
AYAAAAQFPHLELKGVQMHIGSQLTSVTPFAEAVAKVVPFVAELKKLYGITYFSIGGGIG
IIYQDALASGSQAWWDAQPEAERPLTPEAYGAALTPLLAPLGLKILLEPGRFLVGNAGIL
LSRVEYLKRGAAKNFLVVDAAMNDLVRPAMYEAYHEIVPLTRDTTRAALKADIVGPICES
GDCFAKDRTLQAVGEGELIAFMSAGAYGYTMASRYNTRGQVAEVLVSGSRFELVNVRESF
ETMVAGEKIPGFLKI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttccactacgccggtcaaaaactgcactgcgagtccgtcgacctcgccgcc
atcgcccagctccacggcacgccgacctacgtctatagtgcccagacgattgccgataat
taccggcggctggcgtccagcctcaccggcctggatttgcagatttgttacgcgatgaag
gccaactcgaacctggccgtcctgcgccacttcgcgaacctcggcgcggcctttgatctg
gtgagcggcggagaattgcggcgcgtggccgccgcgggcggcgacaccacccgcagcgtc
ttcgccggcgtgggcaagtccgaggccgagatccggctcgcgctggagaccggagtcttt
ggttttcatgtggagagcgagcccgagctggcccgcatcaatcacgtggccgggcagctg
ggccgcaaggcgcccatcgccatccgcatcaaccccgatgtcgacgccaagacccatgcc
aagatcacgacgggcaagagcgacaacaagtttggcatcccgctcaagcacgccgccgcg
gcctacgccgccgccgcgcagttcccccacctcgagctcaagggcgtacagatgcacatc
ggttcgcagctgacctccgtcacgcccttcgccgaggccgtggccaaggtcgtgcccttc
gtcgcggagctgaaaaagctctacggcatcacctatttcagcatcggcggcggtatcggc
atcatctaccaggacgccctcgccagcggcagccaggcctggtgggacgcccagcccgag
gccgagcgtccgctcacgcccgaggcctacggcgcggcgctcaccccgctgctcgccccg
cttgggctcaagatcctgctcgagcccggccgtttcctggtcggcaacgccggcatcctg
ttgtcccgcgtcgagtacctcaagcggggtgccgccaagaacttcctcgtggttgacgcc
gccatgaacgacctggtgcgcccggcgatgtacgaggcctaccatgagatcgtgccgctc
acgcgcgacaccacccgcgccgccctcaaggccgacatcgtcggccccatctgcgagtcc
ggcgactgttttgccaaggaccgcacgctgcaggccgtcggcgagggcgagctcatcgcc
ttcatgagtgccggggcctacggctacaccatggccagccgctacaacacccgcggccag
gtcgccgaggtgctcgtgtcgggcagccgcttcgagctggtcaacgtccgcgagtctttc
gagactatggtcgccggcgaaaagatccccggcttcctcaaaatctga
DBGET
integrated database retrieval system