Lacunisphaera limnophila: Verru16b_01082
Help
Entry
Verru16b_01082 CDS
T04567
Symbol
rlmN_1
Name
(GenBank) putative dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obg03009
]
Verru16b_01082 (rlmN_1)
Enzymes [BR:
obg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Verru16b_01082 (rlmN_1)
Ribosome biogenesis [BR:
obg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Verru16b_01082 (rlmN_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
RlmN_N
DUF6925
Motif
Other DBs
NCBI-ProteinID:
AOS44021
UniProt:
A0A1D8AT04
LinkDB
All DBs
Position
1276719..1277768
Genome browser
AA seq
349 aa
AA seq
DB search
MSTPPTPFHDLTREALRVLTVRWGFSPVHAARLWRYVYLDRVEAWDLMSELPVKYRDRVA
AELSLTPPTVAVETHSSDGYTRKYLLDLADGRRIETVLMRFTGRVTACISSQAGCAMGCV
FCATGQMGFTRHLTPGEIVAQALHVNRVLQATHPDERLRNIVLMGMGEPLHNYEAVMTAT
EILCDTAGLSLGTKQITLSTVGVVPGIIRLADEGRPIHLAVSLHGATQEERAALVPVAKK
WPLDELMDACRYYIAKQQRRIFYEWTLIEGKNDTAESAHAVGRLLQGQDAQVNLIPLNPT
SGYDGIPTGRDAARRFQSILAEYGLPSTVRQRRGIDIAAGCGQLAISKL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacgccacccacccccttccacgacctgacccgcgaggccctgcgcgtcctcacg
gtgcgctggggattcagtcccgtgcatgcggcgcggctctggcgctatgtctacctcgac
cgggtggaagcctgggacctgatgtccgaactgccggtgaagtaccgcgaccgcgtggcg
gccgagctttccctcaccccgccgaccgtcgccgtggagacccacagcagcgacggctac
acccgcaaatacctcctcgacctcgccgacgggcggcggatcgagacggtcctgatgcgc
ttcaccggccgggtcacggcctgcatcagcagccaggccggttgcgccatgggctgcgtg
ttctgcgccaccgggcagatgggtttcacgcggcacctcaccccgggcgagatcgtggcg
caggccttgcacgtgaatcgcgtgctgcaggccacacaccccgacgagcgcctccgcaac
atcgtgctcatgggcatgggcgaacccctgcacaattacgaagcggtgatgacggccacg
gagatcctctgcgacactgccggcctctcgctgggcaccaagcagatcaccctgagcacc
gtgggcgtcgtgcccggcatcatccggctggccgatgagggccgcccgatccacctcgcc
gtctcgctgcatggcgccacccaggaggagcgcgccgcgctcgtgccggtggccaaaaaa
tggccgctcgacgagctgatggacgcgtgccgctactacatcgccaaacaacagcgccgg
atcttctacgagtggaccctgatcgagggcaaaaacgacaccgcggaatccgcccacgcc
gtcggccgcctcctccagggccaggacgcccaggtgaacctgatcccgctcaaccccacg
tccggttacgacggcatcccgaccggacgcgacgcggcccggcgttttcaatccattctc
gccgagtacgggctcccgagcaccgtccgccagcgccggggcatcgacatcgccgccggc
tgcggccagctggcgatttcaaagttgtag
DBGET
integrated database retrieval system
