Lacunisphaera limnophila: Verru16b_01276
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Entry
Verru16b_01276 CDS
T04567
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
obg
Lacunisphaera limnophila
Pathway
obg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Verru16b_01276 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obg02000
]
Verru16b_01276 (lsrB)
Transporters [BR:
obg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Verru16b_01276 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Bmp
ADH_zinc_N
PTH2
Motif
Other DBs
NCBI-ProteinID:
AOS44215
UniProt:
A0A1D8ATI8
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All DBs
Position
1497639..1498625
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AA seq
328 aa
AA seq
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MKSPRILLLSALAVLIAAASSVSAAESKLMIGMLPKAKGNAYFISCKNGADKAAKELGVE
LLFDGPTDSNAAKQNEIVENWITLGLDVITVAAENKESLSTALRKARAQGIAVLTYDADA
MPDARSFFVNQATPAGIALGLLDKAAELAGGEGEIAIITATLTAGNQREWLRIIHETLPV
KYPKLKLIAVRPSDDLKDKAQSEATALMSAHPNLEVIVAICTPGTPGAAEAVKQAGKTGK
VHVIGLGLPNENRRYVHEGVTDAVMLWNTEDLGYLTVYAAAALAHGELKPGAKSFQAGAL
GSFEITGDNILLGKPYFFTKENIDRFDF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaccccgcatcctcctcctgtccgccctcgccgtgctgatcgcagccgccagt
tcggtctccgccgccgagtccaagctcatgatcggcatgctgcccaaggccaagggcaac
gcctatttcatctcctgcaagaacggcgcggacaaggccgcgaaggaactcggcgtggaa
ctgctcttcgacggacccacggacagcaacgcggccaagcagaatgagatcgtcgaaaac
tggatcacgctggggctggatgtcatcaccgtggcggccgagaacaaggagagcctctcc
accgcgctgcgcaaggcgcgggcccagggcatcgcggtgctcacctatgacgcggacgcg
atgccggacgcgcgctcgttcttcgtcaaccaggccacgccggcgggcatcgcgctgggc
ctgctggacaaggcggcggagctggccggcggggagggcgagatcgcgatcatcaccgcc
actctcacggccggcaaccagcgggaatggctgaggatcatccatgaaacgctgccggtg
aaatacccgaagctgaagctgatcgccgtccgcccgagcgacgacctaaaggacaaggcg
cagtccgaggcaaccgccctgatgagcgcccatcccaacctcgaggtcattgtcgccatc
tgcacgcccggcacgcccggcgccgcggaggcggtgaagcaggcgggcaagaccgggaaa
gtgcatgtcatcggcctcggcctgcccaacgagaaccggcgttacgtccacgagggcgtc
accgacgccgtcatgctctggaacaccgaggatctcggctacctcacggtctatgccgcg
gcggcgctggcgcatggcgaactgaagcccggagccaagtcgttccaggccggcgccctc
gggtccttcgagatcacgggggacaacattctcctcgggaagccctatttcttcacgaag
gagaacatcgaccggtttgatttttag
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