Lacunisphaera limnophila: Verru16b_01700
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Entry
Verru16b_01700 CDS
T04567
Symbol
csd
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg00450
Selenocompound metabolism
obg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Verru16b_01700 (csd)
Enzymes [BR:
obg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Verru16b_01700 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Verru16b_01700 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
SelA
KYNU_C
Motif
Other DBs
NCBI-ProteinID:
AOS44634
UniProt:
A0A1D8AUR8
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All DBs
Position
complement(2036831..2038102)
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AA seq
423 aa
AA seq
DB search
MSDLPPSNSDLQAAAWRNVRADFPVLHQQVNGKPLVYLDNGATSQKPRAVIDALVRYYER
DNSNVHRGLHTLSMRATDAYEGARTRLARFINAADPAEILFTRGTTESINLVARSWGHAH
LKPGDVVLTTEFEHHSNLVPWQQAAKAAGATLKYVPLLGADGEGGLDLAALDTLLTPQVK
LFAFTHISNTLGTINPVAELCRRARAVGAVTVIDAAQSIGHVPLDVQQIGCDFLAFSGHK
MCGPTGIGVLYGRRALLDKLAPDETGGGMVVQVTYEGATWKPAPERFEAGTPNVADAIAL
GAACDYLDALGREQIAAHDDRLVRVAMEKLSALPGIRIIGPRAGAERSGLVSFAFEGVHA
HDVVTFADEDGIALRGGHHCNQPLMRKLGLTSTTRASFYLYNTEAEIDRLVASLARIQKF
FAG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctccccccttcgaactccgatctccaggctgcggcttggcgcaacgtccgc
gccgacttccccgtcctccaccaacaggtcaacggcaagcctctcgtctacctcgacaac
ggcgccacctcgcagaaaccgcgcgcggtgatcgacgccctggtccgctattacgagcgc
gacaacagcaacgtccaccgtggcctgcacacgctttccatgcgggcgaccgacgcctac
gagggcgcccgcacccgcctcgcccggttcatcaacgccgccgatcccgctgaaattctc
ttcacccgcggcaccaccgagagcatcaacctcgtcgcgcgtagctggggccacgcgcac
ctgaaacccggcgatgtcgtgctcaccaccgagttcgagcaccactccaacctcgtgccc
tggcagcaggccgccaaagccgcgggtgcgacgctcaaatacgtgcccttgctcggcgcc
gatggcgagggcggactggacctcgccgcgctcgacaccttgctcacgccgcaagtgaag
ctgttcgcgttcacccatatctcgaacacgctcggcaccatcaacccggtcgccgagctc
tgccgccgggcccgggccgtcggtgccgtgaccgtgatcgatgcggcccagtccatcggc
cacgtccctctcgacgtacagcagatcggctgcgatttcctcgccttctccgggcacaaa
atgtgcggcccgaccggcatcggcgtcctctacggccgtcgcgcgctgctggacaagctc
gcccccgacgagaccggcggcggcatggtcgtgcaggtcacctacgagggcgccacctgg
aaacccgcccccgaacgcttcgaagccggcacccccaacgtcgccgacgccatcgccctg
ggcgccgcctgcgactacctcgacgccctcggccgcgagcagatcgccgcgcacgacgac
cggctggtccgcgtcgcgatggaaaaactctccgccctgcccggcatccgcatcatcggc
ccccgcgccggcgccgagcgcagcgggctcgtcagcttcgccttcgagggggtgcacgcg
catgacgtcgtgaccttcgccgacgaggacggcatcgccctgcgcggcggccaccactgc
aaccagcccctcatgcgcaagcttggactgaccagcacgacccgcgcgagtttctatctc
tataacaccgaggcggagatcgaccggctcgtcgcctcgctcgcccgcatccagaagttc
ttcgccggctga
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