KEGG   Lacunisphaera limnophila: Verru16b_02250
Entry
Verru16b_02250    CDS       T04567                                 
Symbol
lpd_1
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
obg  Lacunisphaera limnophila
Pathway
obg00010  Glycolysis / Gluconeogenesis
obg00020  Citrate cycle (TCA cycle)
obg00260  Glycine, serine and threonine metabolism
obg00280  Valine, leucine and isoleucine degradation
obg00310  Lysine degradation
obg00380  Tryptophan metabolism
obg00620  Pyruvate metabolism
obg00630  Glyoxylate and dicarboxylate metabolism
obg00640  Propanoate metabolism
obg00670  One carbon pool by folate
obg00785  Lipoic acid metabolism
obg01100  Metabolic pathways
obg01110  Biosynthesis of secondary metabolites
obg01120  Microbial metabolism in diverse environments
obg01200  Carbon metabolism
obg01210  2-Oxocarboxylic acid metabolism
obg01240  Biosynthesis of cofactors
Module
obg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
obg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
obg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
obg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:obg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Verru16b_02250 (lpd_1)
   00020 Citrate cycle (TCA cycle)
    Verru16b_02250 (lpd_1)
   00620 Pyruvate metabolism
    Verru16b_02250 (lpd_1)
   00630 Glyoxylate and dicarboxylate metabolism
    Verru16b_02250 (lpd_1)
   00640 Propanoate metabolism
    Verru16b_02250 (lpd_1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Verru16b_02250 (lpd_1)
   00280 Valine, leucine and isoleucine degradation
    Verru16b_02250 (lpd_1)
   00310 Lysine degradation
    Verru16b_02250 (lpd_1)
   00380 Tryptophan metabolism
    Verru16b_02250 (lpd_1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Verru16b_02250 (lpd_1)
   00670 One carbon pool by folate
    Verru16b_02250 (lpd_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:obg04147]
    Verru16b_02250 (lpd_1)
Enzymes [BR:obg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Verru16b_02250 (lpd_1)
Exosome [BR:obg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Verru16b_02250 (lpd_1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA DAO HI0933_like NAD_binding_8 FAD_oxidored FAD_binding_2 Lys_Orn_oxgnase 3HCDH_N AlaDh_PNT_C Thi4 2-Hacid_dh_C FAD_binding_3 Lycopene_cycl UDPG_MGDP_dh_N Trp_halogenase ApbA PepSY
Other DBs
NCBI-ProteinID: AOS45174
UniProt: A0A1D8AWA1
LinkDB
Position
2677530..2678924
AA seq 464 aa
MSDAIYDLVIIGGGPAGYVAAIRAGQLGKKVAVIEMERAGGTCLNWGCIPTKALLKSAEL
YRSFQKADAYGLSATGVSFDFAKVVERSRGVAATMAKGVEFLFKKNKVDYFVGKGSVVMA
GMVEVTAGEHKGKFFKTKNILLCTGQKPKQLPGLPADGVRVMTSREALAAKAPPKSIAII
GAGAIGVEFAYFFNAFGSKVTLIEMLPQVLPVEDEEVAKVLERSFTKQGIAIHTGTKCEN
IRSGATSVKLDLVKDGTKTELEVETILVAIGITANLEGLVSPKVKLELDRGFVKVDATYQ
TSTPGIYAAGDIQGPPWLAHVASFRAVQAVEGMFGHAKPKLVGNFPGCTYCQPQVASTGL
TEKQAKEKKLDYKVGKFPFTAVGKAVAAGDTEGFVKVIADAKTGEILGVHIIGNEATELI
AEYGLAMSLEATIDEIHDSIHAHPTLSEALGEAALATHGKAIHI
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtcagacgcaatttacgacttggtgatcatcggcggcggtcccgccggctatgtggcg
gcgatccgtgccgggcagctcggcaagaaggtcgcggtcatcgagatggagcgcgccggc
ggcacctgcctcaactggggctgcatcccgaccaaggccctgctcaagagcgccgagctc
taccgctccttccagaaggcggacgcctacggcctgagcgcgaccggggtgtcgtttgac
ttcgccaaggtggtcgagcgttcgcgcggcgtcgccgcgacgatggccaagggcgtcgag
ttcctcttcaagaagaacaaggtcgactacttcgtcggcaagggttcggtcgtgatggcc
ggcatggtcgaggtcaccgccggcgagcacaaagggaagttcttcaagaccaagaacatt
ttgctctgcacgggccagaagccgaagcagctgcccggcctgccggcggacggcgtgcgt
gtgatgacctcccgcgaggcgctcgccgccaaggcgccgccgaagtccatcgccatcatc
ggtgccggcgccatcggcgtggagtttgcgtatttcttcaacgccttcggctcgaaggtg
acgctcatcgagatgctgccgcaggtgctccccgtcgaggacgaggaggtcgccaaggtt
ctcgagcgcagcttcaccaagcagggcatcgcgatccacaccgggacgaagtgcgaaaac
atccgctccggcgccacgagcgtgaaactcgacctggtgaaggacggcacgaagaccgag
ctcgaagtcgagacgatcctcgtggccatcggcatcacggccaaccttgagggactcgtt
tcgccgaaggtgaagctcgagctcgaccgtggcttcgtgaaggtggacgccacttatcag
accagcacgcccggcatctatgccgccggcgatatccagggcccgccgtggctcgcgcac
gtggcttcgttccgcgccgtgcaggccgtcgagggcatgttcggtcacgccaagccgaag
ctggtgggcaatttcccgggctgcacctactgccagccgcaggtcgccagcacgggcctg
accgagaagcaggccaaggaaaagaaactcgactacaaggtcggcaagttcccattcacc
gccgtcggcaaggccgtcgcggccggcgacaccgagggctttgtgaaggtcatcgccgac
gccaagaccggcgagatcctcggcgtgcacatcatcggcaacgaggccacggagctgatc
gccgagtacggtctcgcgatgagcctcgaggcgacgatcgacgagatccacgactcgatc
cacgcgcacccgacgctgtcggaagcgctgggcgaggcggcgctcgcgacgcacggcaag
gcgatccatatctaa

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