Lacunisphaera limnophila: Verru16b_02577
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Entry
Verru16b_02577 CDS
T04567
Symbol
ribD_2
Name
(GenBank) Riboflavin biosynthesis protein RibD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg00240
Pyrimidine metabolism
obg01100
Metabolic pathways
obg01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Verru16b_02577 (ribD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
obg02044
]
Verru16b_02577 (ribD_2)
Enzymes [BR:
obg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Verru16b_02577 (ribD_2)
Secretion system [BR:
obg02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Verru16b_02577 (ribD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC2
CSN7_HB_subdom
Motif
Other DBs
NCBI-ProteinID:
AOS45496
UniProt:
A0A1D8AX92
LinkDB
All DBs
Position
3040771..3041253
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AA seq
160 aa
AA seq
DB search
MAKKASPPSPIDLIAQATESFPHRPSWDEYFMATAKLIASRSNCERLNVGCVIVSSGQRK
NRLIAAGYNGWLPGTPHASRMRDGHEQATVHAEQNAIADAARRGSSVDGCTAYVTHYPCI
NCAKILAASGIAEIKYHDDYHNDPLVQPILREAGVKVIKL
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaagcttcgccccccagccccatcgacctcatcgcccaggccaccgagtcc
ttcccgcaccggccgagttgggacgagtatttcatggccacggccaagctgatcgcctcg
cgttccaactgcgaacggctgaacgtcggctgcgtgattgtctcgtcgggccagcgcaag
aaccgcctgatcgcggccggctacaacggctggctgccgggcacgccgcacgcttcgcgc
atgcgggacgggcatgagcaggcgacggttcacgccgagcagaacgccatcgccgacgcc
gcccggcgcggctcgagcgtcgacgggtgcacggcgtacgtgacccattacccgtgcatc
aattgcgccaagatcctcgcggcctccggcatcgccgagatcaagtaccacgacgactac
cacaacgacccgctggtccagccgatcctgcgggaggccggcgtgaaggtcatcaagctg
tga
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