Lacunisphaera limnophila: Verru16b_02601
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Entry
Verru16b_02601 CDS
T04567
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Verru16b_02601 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_02601 (priA)
Enzymes [BR:
obg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Verru16b_02601 (priA)
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Verru16b_02601 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
Zn_ribbon_bTOP1
Y_Y_Y
AAA_19
RUBY_RBDX
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AOS45520
UniProt:
A0A1D8AXB7
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All DBs
Position
3059850..3062081
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AA seq
743 aa
AA seq
DB search
MIVGVQPLAGFDKLLHYKVPEHLRAEIHRGSLVRVPILNRPQVGLVLEADTIADVPVERL
KNILEVMQDYPALTPDLLALAKWMHVYYAARMESVLEAMIPAAVRDGTRLKEERFLGLAR
PATPDELVALKKKAPQQARVAEFLAQQFQLVKKSLLLSRLGVTAAVVTALVKRGLVREEV
RHVERVAYADNWSGGEVVTGLPPKLNPEQTAVVDSVGESLTKGKFAVHLLHGVTGSGKTE
VYLRAVEQVLAAGGSAIYLVPEVALTPQTVSRLRGRFEAAGHQTVVWHSHLGEGERLDGW
TALASGKARVVVGARSAIFAPVRDLRLIVVDEEHEPAYKQDETPRYHGRDVAVYRAKLAG
ATCLLGSATPSLESFANVKSGKYRLDVLTKRVDDKKMPDIQIVDMRIEVMRQRGLVTLSR
LLVNHMQARFERREQTILFINRRGYSSSMQCRKCGHVEQCPHCSVAMTYHRADETLKCHL
CGHQRGSPAVCPSCAAPDIRWRGLGTQRVEEAVRRVLPRARMERMDTDTMSKKHRFREIL
SEFRAGKIDVLIGTQMIGKGLDFPNVTLVGLVDADLSMHVPDFRANERTFQLLVQVAGRA
GRGDRSGEVVVQTFTPKADAIQYAKRADFDGFAEVELGVRKQFQYPPYRHLIHHLFRGKN
PEKIKFYAEHWVKQVEKALGSAVEMRGPTPSPIEKVKDEYRYQIWYFCARATKVVPELVR
LQAEMKWPDDVTQILDVDAMSLM
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgggtgtccagccgctggcgggttttgacaagctcctgcactacaaggtgccg
gaacacctgcgggcggaaatccaccgcgggtcgctggtgcgggtgccgatcctcaaccgg
ccgcaggtggggctggtgctggaggcggacacgatcgccgacgtgccggtggagcggttg
aagaacattctggaggtgatgcaggactatccggcgctgacccccgacctgctggcgttg
gcgaagtggatgcatgtgtattatgctgcgcggatggagtccgtgctggaggccatgatc
ccggccgcggtgcgggacggcacgcggttgaaggaggagcgatttctcggtctcgcgcgg
ccggcgacgcccgatgagctagtggccttgaagaagaaggcgccgcagcaggcccgcgtg
gcggagttcctggcgcagcagtttcaactggtgaagaaatccctgttgttgtcgcgcctc
ggcgtcacggccgccgtggtcacggcgctggtgaaacgcggtttggtgcgggaagaggtc
cggcacgtggagcgcgtggcctacgcggacaactggagcggcggcgaggtggtcacgggg
ctgccgccgaagctcaatccggagcagaccgcggtggtggactcggtgggcgagagcctg
acgaaaggcaaatttgccgtgcacctgttgcacggggtgaccgggtccgggaagacggaa
gtctacctgcgcgccgtcgagcaggtgctggcggcggggggcagtgcgatctacctggtg
cccgaggtggcgctcaccccgcagaccgtgtcgcgcctgcgtgggcggtttgaggcggcc
gggcaccagacggtggtgtggcacagtcatctgggggaaggcgagcggctggacggctgg
acggcgctggcctcgggcaaggcgcgcgtcgtggttggcgcgcgctcggcgatctttgca
ccggtgcgcgacctgcggctgatcgtcgtggatgaggagcatgagccggcctacaagcag
gacgaaactccgcgctatcatggtcgggacgtggcggtttatcgcgctaagctggccggg
gcgacctgcctgctgggctcagccacgccgtcgctggagtcgttcgcgaacgtcaagagc
gggaagtaccggcttgatgtgctgaccaagcgggtcgacgacaaaaagatgcccgacatc
cagatcgtggacatgcgcattgaggtgatgcggcagcgcgggctggtgaccttgtcgcgg
ctgctggtgaaccacatgcaggcgcggttcgagcggcgggagcagacgatccttttcatc
aaccggcgcggctactcgtcgagcatgcagtgtcggaagtgcggccacgtggagcagtgt
ccgcattgcagcgtggcgatgacctatcaccgggcggatgagacgttgaagtgccatttg
tgcggccaccagcgcggctcgccggcggtgtgtccgagttgcgcggcgccggacattcgg
tggcgcggcctcggcacgcagcgggtggaggaggcggtgcggcgggtgttgccgcgggcg
cggatggagcggatggacacggacacgatgtcgaagaagcatcggttccgggagatcctc
tcggagttccgcgcgggcaagatcgacgtgctcatcggcacgcagatgatcggcaagggc
ctggatttcccgaacgtcacgctggtggggctggtggacgcggatttgtcgatgcatgtg
ccagatttccgggcgaacgagcggacctttcaactgctggtgcaggtggcgggccgggcg
gggcggggcgaccggtcgggagaggtggtggtgcagaccttcacgcccaaggccgacgcg
atccagtacgcgaagcgggcggattttgacggcttcgccgaagtggagctgggggtgcgg
aagcagttccagtatccgccgtaccggcatttgatccatcatctcttccgcgggaagaac
ccggagaagatcaagttttacgccgagcactgggtgaagcaggtggagaaggcgctgggc
agcgcggtcgagatgcgggggcccacgccgtccccgatcgagaaagtgaaggacgagtac
cggtaccagatctggtatttctgcgcccgggcgacgaaggtcgtgccggagttggtgcgg
ctgcaggccgagatgaaatggcccgacgatgtcacgcagatcctggatgtggatgcgatg
agcttgatgtga
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integrated database retrieval system
