Lacunisphaera limnophila: Verru16b_02604
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Entry
Verru16b_02604 CDS
T04567
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obg03009
]
Verru16b_02604 (rimO)
Enzymes [BR:
obg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Verru16b_02604 (rimO)
Ribosome biogenesis [BR:
obg03009
]
Prokaryotic type
ribosomal protein modification factors
Verru16b_02604 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AOS45523
UniProt:
A0A1D8AXB0
LinkDB
All DBs
Position
complement(3065831..3067255)
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AA seq
474 aa
AA seq
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MIKVSLISLGCAKNLVDSEIMVGHLHEAGMTVIPEAEKADVVIVNTCSFIDSSKEESIGH
ILEVHQHKGMKKRRKEQKLIVAGCMSQRFSKDLSSELHDEVDAFIGLDQVTKVAPIIQEI
YAKERGQGESKAAPANFIEGKSTYIPDYNTPRFRLTPAHFAYVKIAEGCNHPCTFCIIPQ
IRGRHRSRTVDSVVQEARRLVQEGVKELNLISQDTTFFGMDTWEQRPNPRTPVDSSRGTA
LTTLLRELNAIEGDFWIRLLYTHPAHWSDELIRTIAECPKVARYIDIPLQHISDHMLERM
QRETSGDYIRNLIGRIRAGIPGIAVRTTFIVGFPGETDADVAELCTFIEETKFERLGVFR
YSQEEGTRGAKMPDQILPKVKEARWHQLMSLQQRIAAEVSKSYVGRTLRVLVEEPGVARG
EADAPDIDGRIYVSRDLTVGEFVDVKITGYHDYDLLALPKGQQPKEFKIAKQAQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagtcagcctcatctccctcggttgcgccaagaacctcgtcgatagcgagatc
atggtcggtcacctgcacgaggccggcatgaccgtgatccccgaggccgagaaggccgat
gtggtcatcgtcaacacctgctccttcatcgactcgtccaaggaggagtccatcggccac
atcctcgaggtgcaccagcacaagggcatgaagaagcgccgcaaggaacagaagctcatc
gtcgcgggctgcatgtcccagcgcttctccaaggacctctcctccgaactgcacgacgag
gtcgacgccttcatcggcctcgaccaggtcaccaaggtcgcccccatcatccaggaaatc
tacgccaaggaacgcggtcagggcgaatccaaggccgccccggccaacttcatcgagggc
aagtccacctacatcccggactataacacgccccgcttccggctcacccccgcccacttc
gcctacgtcaagatcgccgagggctgcaaccacccctgcacgttctgcatcatcccgcag
atccgcggccgccaccgcagccgcacggtcgacagcgtcgtccaggaagcccgccgcctc
gtgcaagagggcgtcaaggaactgaacctcatttcccaggacacgaccttcttcggcatg
gacacctgggaacagcgcccgaatccgcgcaccccggtcgactcctcccgcggcaccgcc
ctcaccaccctcctccgcgagcttaacgccatcgagggcgatttctggatccgcctcctt
tatacgcacccggcccactggagcgacgagctcatccgcaccatcgccgaatgcccgaag
gtcgcccgctacattgacatcccgctccagcacatctctgaccacatgctggagcgcatg
cagcgtgagaccagcggcgactacatccgcaacctcatcggccgcatccgcgccggcatc
ccgggcatcgccgtccgcaccaccttcatcgtcggcttccccggcgaaaccgacgccgac
gttgccgaactctgcacgttcatcgaggaaaccaagttcgagcgcctcggcgtcttccgc
tactcccaggaggaaggcacccgcggcgccaagatgcccgatcagattctgcccaaggtc
aaggaagcccgctggcaccagctgatgtccctccagcagcgcatcgccgccgaggtttcc
aaatcctacgtcggccgcacgctccgcgtcctcgtcgaggaacccggcgtcgcccggggc
gaggccgacgcccccgatatcgatggccggatctacgtatcccgcgacctcacggtgggc
gaatttgtggacgtcaagatcaccggataccacgattacgatctgctcgccctccccaaa
ggccagcagcccaaagagttcaagatcgcgaagcaggcacagtga
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