Lacunisphaera limnophila: Verru16b_02864
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Entry
Verru16b_02864 CDS
T04567
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obg03032
]
Verru16b_02864 (topB)
Enzymes [BR:
obg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Verru16b_02864 (topB)
DNA replication proteins [BR:
obg03032
]
Prokaryotic type
DNA Topoisomerases
Verru16b_02864 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AOS45776
UniProt:
A0A1D8AY00
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All DBs
Position
complement(3386763..3389588)
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AA seq
941 aa
AA seq
DB search
MKCLIIAEKPSVAADLARALGKIPKKGDHYESDEYVISSAVGHLVGLQMPEDIDKKKYGF
WRLETLPIIPDEFELQPLPEGKERFAQLKKLLARKDVTSVINACDAGREGELIFTYIYQL
TKCKKPFQRLWMSSMTNEGINEAFKSLRSAEQMQGLADAARCRSESDWLIGINGTRALTK
RMFGSRAGNVASVGRVQTPTLAIVYNRELEIRNFIPRGFWRITARFGIAKGEYEGVYQRP
DFRKSDDEHDRIDRIWQQAKAEAILAVCTGQPVASVTEEKKGSTSAPPRLYDLTTLQREA
NSRFGFPAKRTLQIAQALYERHKMITYPRTDSRALPEDYIPLVRQTLANLHGELKVHAAR
VLESGWVQPNKRIFNNAQVSDHFAIIPTQHEAKNLDEAEAKLFDMIARRFVATFHPVAEF
DITTRTSTVAGHAFKTEGKVLTAPGWLAVYGKNAVDDDSPDSKALPALSAEDKAKAATLA
ATLHTETTKPPPRYSESTLLSAMEGAGKLVDDEAMAEAMKERGLGTPATRADTIEGLINQ
KYIDRAQRELIPTTKAEQLFQFLSAVKVDNLTSPTMTGEWEYHLREMEHGKYSRETFMAE
IVKETKGIVERVKGFEEDDSVARTTDIISPTDNKPMKETLRGYKSQDGELMVYKIVGGRR
MEEPEVKQLVETRTVGPLDGFISNKTRNRFSAVLKLAVVEETKKDKATKQDVTTKKWKTE
FDFGDKVDIATLTPLWTDAKTGAELCESGSSYILREKKTDGTWEQTFRIGRIMCQKPILA
EQVIKLVGEGKTDLIENFISKKGRPFSAFLKKEGGKFSWEFPPRAAKLDKDGNPIVRKAK
AKADLAKATVIGESKTHPGGQLVELGDSFYVRKPDQDNRQVFKLSKKLCEVELPAEQVQK
LLTDGRSDLIEGFVSKRGNKFSAYLVLSQKQDKADFEFPPR
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctcatcattgccgagaagccctccgtcgccgccgatctggcgcgcgcgctc
ggcaaaatccccaagaaaggcgaccattacgagagtgacgagtatgtgatctcgtcggcg
gtcggccatctggtggggctccagatgccggaggacatcgacaagaagaaatacggcttc
tggcgcctcgagacactcccgatcatccccgacgagttcgaactccagcccctgcccgag
ggcaaggagcgcttcgcccagctcaagaagctgctggcccgcaaggatgtcacctccgtc
atcaacgcctgcgacgccgggcgcgagggcgagctgatcttcacttatatctaccagctc
acgaagtgcaaaaagccgttccaacggctgtggatgtcgtcgatgaccaatgagggcatc
aacgaggccttcaagagcctgcgttccgccgagcagatgcagggcctggccgacgccgcc
cgctgccgcagcgagagcgactggctgatcggcatcaacggcacccgcgccctgaccaag
cgcatgttcggctcccgcgccggcaacgtcgcctccgtcggccgcgtgcagacccccacc
ctcgccatcgtctacaaccgcgagttggagatccggaacttcatcccccgcggcttctgg
cgcatcacggcccgttttggcatcgccaagggcgagtatgagggcgtgtaccagcgcccg
gatttccggaagtccgacgacgagcatgaccgcatcgaccgcatctggcagcaggccaag
gccgaggcgatcctggccgtttgcacgggccagccggtcgcgagcgtcaccgaggagaag
aagggcagcacctccgccccgccccgcctctacgacctgaccacgctccagcgcgaggcc
aacagccgcttcggtttcccggccaagcgcacgctccagatcgcccaggcactctacgag
cgccacaagatgatcacctacccccgcaccgactcgcgcgcgctgccggaggattacatc
ccgctcgtccgccagactctggccaacctgcacggcgagctcaaggtccacgccgcccgc
gtgctcgagtccggttgggtgcagcccaacaagcgcatcttcaacaacgcccaggtctcg
gaccacttcgccatcatcccgacccagcacgaggccaagaatctcgacgaggccgaggcg
aagctgttcgacatgattgcgcgacgcttcgtcgccaccttccacccggtcgccgagttc
gacatcaccacgcgcaccagcacggttgccggtcacgcgttcaagaccgagggcaaggtg
ctcaccgcccccggctggctcgccgtgtacggcaagaatgccgtcgacgacgactccccc
gattccaaggccctgcccgccctctccgccgaggacaaggcgaaggccgcgaccctcgcc
gccacgctgcacaccgagaccaccaagccgccgccgcgctactcggaatccaccctcctt
tccgccatggaaggcgccggcaagctcgtggacgacgaggccatggccgaggccatgaag
gaacgcggcttgggcacgcccgccacgcgcgctgacaccatcgagggcctgatcaaccag
aagtacatcgaccgcgcccaacgcgagctcatccccacgaccaaggccgagcagctcttc
cagttcctttccgccgtcaaggtcgacaacctcaccagcccgaccatgaccggcgagtgg
gagtaccacctgcgcgagatggagcacggcaagtattcccgcgagacgttcatggccgag
atcgtcaaggagacgaagggcatcgtcgagcgcgtgaagggcttcgaggaggacgactcc
gtcgcccgcaccaccgacatcatctcccccacggacaacaagccaatgaaggaaaccctc
cgcggctacaagtcgcaggacggcgagctcatggtctacaagatcgtcggcggccgccgc
atggaggaacccgaggtcaagcagctggtcgagacccgcacggtcggcccgctcgacggc
ttcatttccaacaagacccgcaaccgcttctccgccgtgctcaagctggccgtcgtcgag
gagaccaagaaggacaaggccaccaagcaggacgtcaccaccaagaagtggaagaccgag
ttcgatttcggcgacaaggtcgacatcgctacgctcaccccgctgtggaccgacgccaag
accggcgccgaactctgcgagagcggcagcagctacatcctccgcgagaagaagaccgac
ggcacctgggaacagaccttccggatcggccgcatcatgtgccagaagcccattttggcc
gagcaggtcatcaagctcgtcggtgagggcaagacggacctgatcgagaatttcatctcc
aagaagggccggcccttcagcgcgtttctcaaaaaggagggtggcaagttctcctgggaa
ttcccgccccgcgccgcgaagctcgacaaggacggcaacccgatcgtccgcaaggcgaag
gccaaggccgacctggccaaggccacggtcatcggcgagagcaagacccaccccggcggc
cagctggtcgaactcggcgactccttctacgtccgcaagccggaccaggacaaccgccag
gttttcaagctctccaagaagctctgcgaggtcgaactgccggccgaacaagtgcagaag
ctcctcaccgacggtcgcagcgacctgatcgagggcttcgtctccaagcgcggcaacaag
ttcagcgcctacctcgtcctgtcccagaaacaggacaaggccgacttcgaatttcctcct
cggtga
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