Lacunisphaera limnophila: Verru16b_03058
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Entry
Verru16b_03058 CDS
T04567
Symbol
yphF
Name
(GenBank) ABC transporter periplasmic-binding protein YphF precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
obg
Lacunisphaera limnophila
Pathway
obg02010
ABC transporters
obg02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Verru16b_03058 (yphF)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Verru16b_03058 (yphF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obg02000
]
Verru16b_03058 (yphF)
Transporters [BR:
obg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Verru16b_03058 (yphF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Asp_Glu_race
PucR
Motif
Other DBs
NCBI-ProteinID:
AOS45967
UniProt:
A0A1D8AYL2
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All DBs
Position
complement(3597699..3598646)
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AA seq
315 aa
AA seq
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MYPRLLALVFLCFALSARAAETYTLGMIAKSQGNQFFEAARAGANDAAREFGAKHGITIK
IDWRTPNEEDAQKQADFVEQLVLNGVDGIILSCSDANKLTDAIDRAVGQGIPVVTFSGDA
PASQRMVSIGIDDFKCGERTFEELARLLGGQGVVAAIDGNPNAVNLQQRAAGFRAAAKRH
PGIKLLDIYYHKETPLDAVAKIEQVMQANPDITGWGFLGGWPLFTDRALKWPPGTIKCVS
VDALPPQLPYVRSGHVQLLLSQDVYGYGYNAVARLIEKLHFKKSPAGPIEDTELTAITTE
NVDAFAKNWEKWLPE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacccccgcctgctcgccctggttttcctatgtttcgccctctccgcccgtgccgcg
gaaacctacaccctaggcatgatcgccaagtcgcaggggaaccagttcttcgaggcggcg
cgcgccggcgcgaacgacgccgcccgcgagttcggcgcaaagcatggcataacgatcaag
atcgactggcgcacgcccaacgaggaggacgcgcaaaagcaggcggacttcgtggagcag
ctggtgctgaatggcgtggacggcatcatcctgagctgttccgacgccaacaagctgacc
gacgcgatcgaccgggccgtggggcaggggatcccggtggtgaccttttcgggcgacgcc
ccggcgagccagcggatggtctccatcggcatcgatgatttcaaatgcggcgagcgcacc
ttcgaggagctggcgcggctgctgggcgggcagggcgtggtcgccgcgatcgacggcaac
cccaacgccgtgaacctgcagcagcgcgccgcgggtttccgcgccgccgcgaagcgtcat
ccggggatcaagctgctcgacatctattatcacaaggagaccccgctggatgccgtcgcg
aagatcgagcaggtgatgcaggcgaaccccgacatcacgggctggggttttctggggggc
tggccgttgttcaccgaccgggcgctgaagtggccgccgggcacgatcaagtgcgtgtcg
gtggacgccctcccgccgcagctgccctacgtgcgcagcgggcacgtgcagttgctgctc
tcgcaggatgtctacggctacgggtacaatgctgtcgcgcgcctcatcgaaaaactccac
ttcaagaaatcgcccgccggccccatcgaggacacggagctcaccgccatcaccacggag
aacgtggacgccttcgccaagaactgggagaagtggctgccggagtga
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