Lacunisphaera limnophila: Verru16b_03089
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Entry
Verru16b_03089 CDS
T04567
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg02024
Quorum sensing
obg03060
Protein export
obg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Verru16b_03089 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Verru16b_03089 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Verru16b_03089 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
obg02044
]
Verru16b_03089 (ffh)
Enzymes [BR:
obg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Verru16b_03089 (ffh)
Secretion system [BR:
obg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Verru16b_03089 (ffh)
Eukaryotic Sec-SRP protein
Verru16b_03089 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_33
AAA_16
AAA_22
6PF2K
APS_kinase
cobW
ATP_bind_1
AAA_17
AAA_30
KTI12
Motif
Other DBs
NCBI-ProteinID:
AOS45998
UniProt:
A0A1D8AYN6
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All DBs
Position
3625303..3626646
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AA seq
447 aa
AA seq
DB search
MFESLTEKLTGALRSLRGTGALTEANMADALKEVRAALLSADVHFTVARDFIARVQAACV
GQAVLKSVSPGQQVVKIINDELVKLLGEGTTELAAKRPLKVLMVGLHGSGKTTSTAKLGK
LLKKKGARPFVVGCDIYRPAAIDQLEILAKQEELGFYSDRVTKDVPALGTTGLATALAQN
ADVILFDTAGRLQIDTDLIEEVKKLKAAVTPDEIILVADGALGQEAVNVAKAFHDALGLT
GLILTKLDGDTRGGAALSIKSVTGVPIKFIGVGEKTADFEPFYPERLASRILGMGDVVSL
VERAQENIDQAEAEKMAEKLRKADFNLEDFLAQMQQVKKMGSMQSIMGMMPGMSGVQLPG
DAEKQMKRTEAIIQSMTIQERRKPSLLNGNRRMRIANGAGVKVLEVNQLIKQFEQMQKLM
KMMKGGNQQKMMRQMEQMKRRGGMPGF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaatccctgaccgaaaaactgaccggcgccctgcgctccctgcgcggcaccggc
gccctgaccgaggccaacatggccgacgccctgaaggaagtccgcgccgccctgctctcg
gccgacgttcatttcacggtcgcccgcgatttcatcgcccgcgtccaggccgcatgcgtc
ggccaggccgtcctcaagtccgtctcccccggccagcaggtggtcaagatcatcaacgac
gagctcgtgaagctcctcggcgagggcacgaccgaactcgccgccaagcgcccgctcaag
gtcctgatggtcggtctccacggctcaggcaagaccacctccaccgccaagctcggcaag
ctgctcaagaagaagggcgcccgccccttcgtcgtcggctgcgacatttaccgccccgcc
gccatcgaccagctcgagatcctcgcgaagcaggaggaactcggcttctactccgatcgc
gtgaccaaggacgtccccgccctcggcaccacgggccttgcaaccgcgctggcgcagaac
gccgatgtcatccttttcgacaccgccggccgcctccagatcgacaccgacctcatcgag
gaggtgaagaagctgaaggccgccgtcacgcccgatgagatcatcctcgtcgccgacggc
gcgctcggccaggaggccgtcaacgtggctaaggcgttccacgacgcgcttggcctcacc
ggcctcatcctcaccaagctcgacggcgacacccgcggcggtgcggcgctctcgatcaag
tccgtcaccggcgtgcccatcaagttcatcggcgtcggcgagaagaccgccgactttgag
ccgttctatcccgagcgcctcgcgtcgcgcatcctcggcatgggcgacgtcgtctccctc
gtcgagcgcgcccaggaaaacatcgaccaggccgaggccgagaagatggctgagaagctc
cgcaaggcggacttcaacctggaggacttcctcgcgcaaatgcagcaggtgaagaagatg
ggctcgatgcagtccatcatgggcatgatgcccggcatgagcggcgtccagttgcccggc
gacgccgagaagcagatgaaacgcaccgaggccatcatccagtcgatgacgatccaggag
cgccgcaagcccagcctgctcaacggcaaccgccgcatgcgcatcgccaatggcgccggc
gtgaaggtcctcgaggtcaaccagctcatcaagcagttcgagcagatgcagaagctcatg
aagatgatgaagggcggcaaccagcagaagatgatgcgccagatggaacagatgaaacgc
cgcggcggcatgcccggcttctga
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