Lacunisphaera limnophila: Verru16b_03242
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Entry
Verru16b_03242 CDS
T04567
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_03242
Enzymes [BR:
obg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Verru16b_03242
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Verru16b_03242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AOS46145
UniProt:
A0A1D8AZ41
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Position
complement(3806860..3808449)
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AA seq
529 aa
AA seq
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MPRPLRHLILVLGDQLDLAASAFDGFDCAQDAVWMAEVAEESTHVWSGRPRIALFLSAMR
HHREALRAAGRTVHYRELEESGKGGGLAEELTRAIARLKPQRLILTEPGDWRVGEALVQA
AKAAGCPLEVRDDRHFYATRADFATHARGRKQLRMEYFYREMRRKHGVLLDAAGEPEGGQ
WNFDPENRGSLLAGGPAGLKAPVKFEPDAITRGVIDLVNRVFADHPGKLDQFDWPVTTVE
ARVALQDFIAHRLEKFGQYQDAMWTEEAWLYHSRLAAAMNLKLLDPREVVGAAEQAWRKG
RVPLAAAEGFIRQILGWREYVRGVYWRSMPGYVELNALEAHGALPQFYWTGDVPMVCLSQ
AIRQSLELGYAHHIQRLMVTGLYGLMLGVEPRKVHEWYLAVYVDAVEWVELPNTLGMSQY
ADGGIMASKPYVATGKYIQRMSNYCAGCRFDPAKATGPEACPFTTLYWDFLQRHEKRLAA
NPRMALQVKNLARLKPAELAAIRQQAGAIRANGGVPPVGPGEPGLLALT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccccgaccgcttcgtcatctgattctggtgctcggcgaccagctcgacctcgccgct
tcggcattcgacggctttgattgcgcgcaggacgccgtgtggatggcggaagtcgcggag
gaatccacgcacgtgtggtccggccggccgcgcattgcgttgtttttgtccgcgatgcgg
catcaccgggaggcgctgcgcgcggccggccgcacggtgcattatcgtgagctcgaggaa
agcgggaagggcggcgggctggcggaggagctgacgcgcgcgatcgcgcggctgaagccg
cagcggctgatcctgacggagccgggcgactggcgggtgggggaggcgctggtgcaggcg
gcgaaggccgcggggtgtccgctggaggtgcgggatgaccggcacttctacgccacgcgc
gcggatttcgccacgcatgcgcgcgggcgcaagcagctgcggatggaatatttttatcgg
gagatgcggcggaagcacggggtgctgctcgatgcggcgggcgagccggagggtgggcag
tggaattttgatccggagaaccggggcagcctgctggcgggcggaccggcggggctgaag
gcaccggtgaaattcgagccggacgcgatcacccgcggggtgatcgacctggtgaaccgg
gtgttcgcggatcatccgggcaagctggaccagtttgactggccggtgacgacggtggag
gcgcgggtggcgctgcaggatttcattgcgcaccggttggagaaattcggccagtatcag
gatgccatgtggaccgaggaggcgtggctttatcattcgcggttggcggcggcgatgaac
ctgaagctgctcgatccgcgggaagtggtcggcgctgcagaacaggcgtggaggaaggga
cgggtgccgttggcggcggccgagggattcatccggcagatcctcgggtggcgggagtac
gtgcgcggggtgtactggcgatccatgccgggttacgtggagttgaatgcgctcgaggcg
cacggcgccttgccgcaattctactggacgggggatgtacccatggtgtgcctcagccag
gcgatccgccagtcactggaactcgggtacgcccatcacatccagcggctgatggtcacg
gggctctatgggttgatgctgggggtggaaccgcgcaaggtgcacgagtggtacctggcc
gtttatgtggacgccgtggagtgggttgagctgcccaacacgctcggcatgtcgcaatac
gccgatggcggcatcatggcctcgaagccgtatgtcgcgacggggaagtacatccagcgg
atgagcaattattgtgcgggctgccggtttgatccggccaaggcgacggggccggaggcg
tgtccgtttacgacgctctactgggattttctgcagcgtcacgaaaaacggctggcggcg
aatccgcgcatggcgctgcaggtcaaaaatctcgcgcgactgaagccggccgagctcgcg
gcgatcaggcaacaggcgggggcgatccgggcgaatggcggggtgccacccgtggggccg
ggtgaaccgggattgttggcgcttacctga
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