Lacunisphaera limnophila: Verru16b_03369
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Entry
Verru16b_03369 CDS
T04567
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Verru16b_03369 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_03369 (alkA)
Enzymes [BR:
obg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Verru16b_03369 (alkA)
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Verru16b_03369 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AOS46269
UniProt:
A0A1D8AZF0
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All DBs
Position
3970241..3970873
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AA seq
210 aa
AA seq
DB search
MKPALPYDPAAAVAHLRAADPVLAALIHRIGPFSLQLTPTRSLFEALLRSIVYQQLHGKA
AASIHGRVLAELKKAGGPTPAAAAATSDEALRAAGLSRNKHLAVRDLAARCLDGTVPTLA
AARKLPDDELITRLTAVRGIGPWTVHMLLLFHLGRPDVMPTGDFAIRLAFQRLYRRRTAP
TPAAILRHARAWQPCRSVASWYLWRSLDTP
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgcgcttccctacgaccccgccgccgccgtcgcccacctccgcgccgccgac
cctgtcctggccgcgctcatccaccggatcggccccttctcgctgcaactcaccccgacc
cgcagcctgttcgaggccctgctccgctccatcgtctaccaacagctccacggcaaggcc
gccgcctccatccacggccgggtgctggcggaattgaaaaaagccggcggcccgaccccg
gccgccgccgccgcgacctccgacgaggccctgcgggccgccggactctcccgcaacaag
cacctcgccgtgcgcgatctcgcggcgcgctgcctcgatggcaccgtgcccacgctggcc
gccgcgcggaaactgcccgacgacgaactcatcacccgcctcaccgccgtgcgcggcatc
ggcccgtggaccgtccacatgctgctcctcttccacctcggccggcccgacgtcatgccg
acgggcgacttcgccatccggctcgccttccaacggctgtatcgccgccgcaccgcgccc
acgcccgccgccatcctccgtcacgcccgcgcctggcaaccctgccgctccgtcgccagc
tggtacctctggcgctccctcgacaccccctga
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