Lacunisphaera limnophila: Verru16b_03377
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Entry
Verru16b_03377 CDS
T04567
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obg03032
]
Verru16b_03377 (ihfB)
03036 Chromosome and associated proteins [BR:
obg03036
]
Verru16b_03377 (ihfB)
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_03377 (ihfB)
DNA replication proteins [BR:
obg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Verru16b_03377 (ihfB)
Chromosome and associated proteins [BR:
obg03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Verru16b_03377 (ihfB)
DNA repair and recombination proteins [BR:
obg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Verru16b_03377 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HTH_43
DUF4777
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AOS46277
UniProt:
A0A1D8AZH3
LinkDB
All DBs
Position
complement(3977534..3977875)
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AA seq
113 aa
AA seq
DB search
MSTNLTKREIVLEIYEKTGFPQKQIQDTVQMTLDIVMDALAAGRNVELRNFGVLEVQVRK
ARVGRNPNKPETEVVIPERAVVKFKSGKILKQKIKALSLEKLKSNPPPAASAD
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacctgaccaaacgtgagatcgtcctggaaatctacgagaagaccgggttt
ccgcagaaacaaattcaagacacggtccagatgacccttgatatcgtgatggatgcgctg
gccgccggccgcaacgtcgagctccgtaacttcggtgtgttggaggttcaggtgcgcaaa
gcccgggtgggccgcaacccgaacaagcccgagaccgaggtcgtcattccggagcgggcc
gtggtgaagttcaagtcgggtaagattctgaagcagaagatcaaggcgctgagcctcgag
aagctgaagtccaatccgccgccggccgcctcggctgactaa
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