Lacunisphaera limnophila: Verru16b_03539
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Entry
Verru16b_03539 CDS
T04567
Symbol
araF
Name
(GenBank) L-arabinose-binding periplasmic protein precursor
KO
K10537
L-arabinose transport system substrate-binding protein
Organism
obg
Lacunisphaera limnophila
Pathway
obg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Verru16b_03539 (araF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obg02000
]
Verru16b_03539 (araF)
Transporters [BR:
obg02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
L-Arabinose transporter
Verru16b_03539 (araF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AOS46433
UniProt:
A0A1D8AZW9
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All DBs
Position
complement(4149455..4150468)
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AA seq
337 aa
AA seq
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MKIPAPLVLILLSAGLLAGCSKQTATPAPASAPAKIKIGFLVKQPEEPWFQFEWKGADAA
AKQYGFEVVKLGVTDGEKVMTAIDSLVAGGAQGFVICTPDVRLGPAIAARAKLKGLKLIT
VDDQFVSADGKFMTEVPYLGMSASKIGAAQGEALYAEMQRRGWPVAETAVCAITFEELDT
ARERTDASIAALRAAGFPADRIFKAPQKTTDIPGSLDAANILLTQHPDVKRWLVLGMNDN
AVLGAIRATEGRGFTAENVIGIGINGTDCIDELRKAKPTGFHGSMLVSAPQEGFQTAEML
YHWIKDGTVPPADTRTSGILITRENFEQVLRKEGIID
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccccgccccactggtcctgatcctcctgagcgccggtctgctggccggttgc
agcaaacaaaccgccacgcccgcgcccgcctccgcgccggcgaagatcaagatcggtttc
ctggtgaagcagcccgaggaaccctggttccagttcgaatggaagggtgccgatgcggcc
gcgaagcagtacggtttcgaggtggtgaagctcggcgtgaccgacggcgagaaggtcatg
accgccatcgacagcctcgtggccggcggggcgcagggtttcgtgatctgcacgcccgat
gtccgcctcgggcccgccatcgcggcgcgcgcgaaactcaaggggctcaagctcatcacc
gtggacgaccagttcgtgtcggccgacggcaagttcatgaccgaggtgccctacctcggc
atgtcggccagcaagatcggcgccgcacagggcgaggcgctttacgcggagatgcagcgc
cgcggctggccggtggcggagaccgctgtgtgcgccatcaccttcgaggaactcgacacc
gcgcgcgagcgcaccgacgcctccatcgccgccctccgggccgcggggtttccggccgac
cgcattttcaaggcaccgcaaaagaccaccgacatcccgggcagcctcgatgccgccaac
atcctgctcacccagcacccggacgtgaagcgctggctcgtcctcggcatgaacgacaac
gccgtgctcggcgccatccgcgcgaccgagggccgcggcttcaccgcggagaacgtgatc
ggcatcggcatcaacggcaccgactgcatcgacgagttgcgcaaggcgaagcccaccggc
ttccacggctcgatgctcgtctccgccccgcaggagggcttccagaccgccgagatgctc
tatcattggatcaaggacggcaccgtcccgccggccgacacccgcaccagcggcatcctg
atcacccgcgaaaatttcgaacaggtgctgcggaaggaagggatcatcgattga
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integrated database retrieval system
