Lacunisphaera limnophila: Verru16b_03553
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Entry
Verru16b_03553 CDS
T04567
Symbol
rlmI_3
Name
(GenBank) Ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obg03009
]
Verru16b_03553 (rlmI_3)
Enzymes [BR:
obg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Verru16b_03553 (rlmI_3)
Ribosome biogenesis [BR:
obg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Verru16b_03553 (rlmI_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
FtsJ
Methyltransf_25
PUA_3
Methyltransf_15
PrmA
Methyltr_RsmB-F
Spermine_synth
Methyltransf_11
MTS
TRM
TRM5-TYW2_MTfase
PUA
UPF0020
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AOS46447
UniProt:
A0A1D8B002
LinkDB
All DBs
Position
complement(4162320..4163591)
Genome browser
AA seq
423 aa
AA seq
DB search
MEAEDAELENPKAPIDPIRPPKGDPIPQSQWQKPWAQLKFVSFQPAIFPRMLGEVSRDAR
PGDLVNVYDKFGHRVGIGLFNPRAKMPLRVVVHTDQPMGEEYFETAIRRAVALRREMFKL
DATTNAYRVLNSDGDGVSGLTIDRYADTLYCDVYSLGIFLRLPKWLPLLHELLGTKHVRV
HVDHDLGSLEGIKPSQMKEITASAPDKVRIREGDVKYEVDFAEGHKTGFFCDQRDNRKRF
GQLVKDLRVLDLCSYTGGFSINAILGGAAEVTAVDLDEKVIAQGRRNANLNQVSPNKLKW
VHTDAFAYARQMQKNGEQFDAVLCDPPKFVMTRDPAFAAEGMRKYADLNTIAASLVKPGG
LFVTCSCSGLVSLEDFEGCVIKGVHRLGRRLQIFDRTGPGVDHPVYSNCLESRYLKLLWA
RVV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaagacgccgaactggaaaacccgaaggccccgatcgacccgatccgcccg
ccgaagggcgatcccatcccccaatcccagtggcagaagccctgggcgcagctgaagttc
gtcagcttccagccggccatcttcccgcgcatgctcggcgaggtgtcgcgggacgcccgg
ccgggcgacctggtcaacgtgtacgacaagttcggccaccgcgtgggcatcgggctcttc
aatccgcgggccaagatgccgctgcgggtggtggtccacaccgaccagccgatgggcgag
gagtatttcgaaacggcgatccgccgggccgtggccttgcgccgggagatgttcaagctc
gacgcgaccacgaacgcctaccgggtgctcaattccgacggcgatggtgtgagcggcctg
acgatcgaccggtacgccgacaccctctattgcgacgtgtattcgctgggcatcttcctg
cgcctgccgaaatggctgccgttgttgcacgagctgctgggcacaaagcacgtgcgcgtg
cacgtggatcacgacctcggcagcctcgagggcatcaagccctcgcagatgaaggagatc
accgcgtccgcccccgacaaggtgcggatccgcgagggcgacgtgaagtacgaggtggat
ttcgccgaggggcacaagacgggtttcttctgcgaccagcgcgacaaccggaaacgcttc
ggtcagctcgtgaaggacctgcgggtgctcgacctgtgcagctacacgggcggtttctcc
atcaacgccatcctcggcggcgcggccgaggtgacggcggtggacctcgacgagaaggtc
atcgcgcagggccggcgcaatgcgaacctgaaccaagtttctccgaacaagctcaagtgg
gtgcacaccgacgccttcgcttacgcgcggcagatgcagaagaacggcgagcagtttgac
gccgtgctgtgcgacccgccgaagttcgtcatgacgcgcgatccggcctttgccgccgag
ggcatgcggaaatacgccgacctgaacaccatcgcggccagcctcgtgaaacctggcgga
ctgtttgtcacctgctcgtgctccggccttgtgtcgctggaggatttcgaaggttgcgtg
atcaagggtgtgcaccgcctcggccgccgcttgcagatcttcgaccgtaccggtcccggc
gtggaccatccggtgtattcgaactgtctcgagagccgttacctcaagctgctgtgggcg
cgggtggtgtga
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