Octopus bimaculoides (California two-spot octopus): 106867281
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Entry
106867281 CDS
T04127
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106867281
09122 Translation
03013 Nucleocytoplasmic transport
106867281
03015 mRNA surveillance pathway
106867281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106867281
03041 Spliceosome [BR:
obi03041
]
106867281
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106867281
Spliceosome [BR:
obi03041
]
Common components
Common spliceosomal components
Cap binding complex
106867281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF3450
Adaptin_binding
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
106867281
NCBI-ProteinID:
XP_014767603
UniProt:
A0A0L8I1R9
LinkDB
All DBs
Position
3:30011093..30060978
Genome browser
AA seq
788 aa
AA seq
DB search
MSRRRRGSFSDDEDTRSRKRRRTNDFLDIEERLESLITRVGEKSTSSLESNLEGLANVLE
TDLPNYKHKILKILCECVVRLPEKLTVYTTLVGLLNAKNYNCGGEFVEMLVRNLKECLKA
GYFEGARIMVRFLCDLVNCHVIVAGSLLSMFDNFVEVTLEDNIPQVRSDFYVYAVLSSLP
WVGRELYEKKETELDKLLLVIENYISKRSKSHVAALKVWSKDTPHPQEEYLDCLWAQIKN
LKNNKWIERQILRPYLAFDNILCEALQHTLPQVTPPSHHEDTIYPLPSVVFRMFDYTDVP
EGPVLPGSHSIERYLIEDQLHSIISTNHNERKDCATLLLGLHNKNKIPLNYMIVEVMFAQ
LLNLPRAPFLELFYGSTLIELCKLQPSSMPQVLAQATEMLFDRIESMKTSSIVRVSKWFA
YHLSNFQFCWSWDDWVSCASQDIDMPKPKFIQETLLRCLRLSYHQRIQDFMPSEFTALIP
MKPSVNYKYEREGSGSLPGTVVAHQLKEALKNKCSTDEALEILKDLPNPLQDEENEPTHN
PLKIDVFVSTILYLGSKSFSHSFSAIAKFHYIFKTLVENEEGQICLLKTVYDLWRTHQQM
LVVLIDKLLKTQIIECSAVANWLFSDEMSHAFTSFFVWEIMHSTIKKMMKHVTKLQKEVE
DARDKHESAQQKADDLDPDKDDETPNAEMIERMVEKLEAAQSQQKNLFLILFQRFIILLT
EHFARCEAEGIDWNTSRYKWVIERLHEVFLTHHELVFTYISTLENLLFTSDIDVHILEIF
QQFCALRS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgaagacgtggttccttcagtgacgatgaagacactcgttcgaggaagcgg
aggaggacaaatgactttctggatattgaagaacggttggaatctttgattaccagggtt
ggagaaaagagcacctcatcattggagagtaaccttgaaggacttgctaatgtacttgaa
actgatctaccaaattacaagcataaaattctgaaaatattatgtgaatgtgttgttcga
ttacctgagaagttaactgtttatacaactttggtgggattgttgaatgccaagaactat
aactgcgggggcgagtttgtagaaatgctggtccgaaatttaaaagaatgcctgaaagca
ggatattttgaaggtgccaggattatggttcgttttctgtgtgacctggtcaactgccat
gtaattgtggctggatcgttgttgtctatgtttgacaattttgtcgaagtgactcttgaa
gataacattcctcaggtgcgatccgacttttatgtttatgcagttttatcatctctacca
tgggttggaagagaattgtatgagaaaaaagaaactgaattagataagctattgttagtg
attgagaactatatcagtaaaagatcaaaatctcatgttgctgctctgaaagtttggtcc
aaagatactcctcatccacaagaagagtacttggactgcttgtgggctcagataaaaaat
ctgaagaataacaaatggattgaaaggcagattcttcgcccctatttggcatttgataat
attctctgtgaagccttacagcatactttgccccaagttactcctccatcacatcacgaa
gacacaatttatccactgcctagtgtagttttcaggatgtttgattatacagatgtgcct
gagggccctgtcctacctgggagccactcaattgaacgatatttaattgaagaccagttg
cacagtattatttctaccaaccacaatgaaagaaaagattgtgccacattgctgcttggt
cttcataataagaacaaaatacctttgaattatatgatagttgaggttatgtttgctcaa
ctcctgaatctaccacgtgctccatttttggaattgttctatggctcaactttgattgag
ctctgtaagctgcaacctagctccatgccacaagttttggctcaagcaacagagatgctt
tttgacagaatagagtctatgaaaacctcctctattgtaagggtttcaaaatggtttgcc
tatcatttgagtaatttccagttctgttggagctgggatgactgggtctcctgtgcatca
caagatattgatatgcccaaacctaaattcatccaagagactttattgagatgtcttcgt
ttgtcttatcatcagaggatccaggattttatgcccagcgaatttacagcactaattcca
atgaagccttctgttaattataaatatgaacgagaagggtctggatctttacctggtacc
gttgttgctcatcaactaaaagaggcccttaagaacaagtgctcaacagatgaagctctt
gaaattctcaaagatcttcccaatccattacaggatgaagaaaatgaacctacccacaac
cccttaaaaattgatgtttttgtgtctacaattttatatttgggctccaagtcttttagt
cattccttctctgcaattgcaaaatttcattatatatttaaaacactggtcgaaaatgaa
gagggtcagatatgtctcctaaaaactgtgtatgatttatggaggacacatcaacagatg
ctggtagtcttgatagataaactactgaagactcagataatcgaatgctcagctgttgct
aattggttgttttctgatgaaatgagccatgcatttacaagtttctttgtatgggaaata
atgcacagtactatcaagaagatgatgaaacatgtcacgaaacttcagaaagaagtggaa
gatgcaagagacaaacatgaatcagctcagcaaaaggcagatgatctggatcctgacaaa
gatgatgaaaccccaaatgcagaaatgattgaacgcatggtagagaaactagaagctgct
cagagtcaacagaaaaatttatttcttattctatttcagcgttttattattttattaact
gagcattttgcccgttgtgaagctgaaggtattgactggaacacctccagatataaatgg
gttattgaacgacttcatgaagtatttttaactcatcatgaattggtgttcacatatata
agtacgcttgagaatctgctgttcaccagtgacattgatgtacacatcctggaaatattc
caacagttctgtgcacttcgttcttag
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