Octopus bimaculoides (California two-spot octopus): 106867643
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Entry
106867643 CDS
T04127
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106867643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106867643
Spliceosome [BR:
obi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
106867643
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
106867643
NCBI-ProteinID:
XP_014768059
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All DBs
Position
21:38489091..38511327
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AA seq
373 aa
AA seq
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MAPNNPLSIWGNEKTMNLNTLILTNIQSSPYFKVNLYELKTYHEVIDEIYYKVSHLEPWE
KGSRKTAGQTGMCGGVRGVGAGGIVSSAFCLLYKLFTLRLTKKQVNGLISHQDSPYIRAL
GFMYIRFTQPPQELWDWFEPYLDDEEEIDVKAGGGHSMTIGEMLRHWLTKLEWYSTLFPR
IPVPTQKDLDEKMKARAFSMNQMNDTTSKAPGLSATEEVVAEVDEDWHNVEQPVESNSKS
ARSPERRRYDRPRDKLPSSSSSSHQMSPLSKVSDKNRMSHSPHGKSPRSRSPHSRRSSPH
RKSPSSSSHKYSSSSQQQQLSSMDDFAVELARERERQRRERERERNGRHKDHHHQQQQQQ
QQQQQQQQHDLTD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcccctaacaaccctctgtcaatatggggcaatgagaagacgatgaaccttaatact
ttaatcctgaccaacatacaatcatccccttacttcaaggtcaatctctatgaactgaaa
acttaccatgaagtgatagatgagatctattacaaagtgtcgcatttggaaccatgggaa
aaaggaagccggaagactgctggacagactggaatgtgcggtggggtgcgaggcgtcgga
gccggtggcattgtttccagtgcgttttgtctcctctataaattgtttactttgaggttg
accaaaaaacaagtgaacggcttaatcagtcaccaggactccccttacatcagagcccta
gggttcatgtatatcaggtttactcagccacctcaggaattatgggattggtttgagccc
tatctggacgatgaagaggaaattgatgtgaaggccggtggaggtcacagtatgacgatc
ggtgagatgctgcgtcattggttgaccaagttggaatggtattccaccctgttccctcgc
attcctgtacccacacagaaggatctcgatgagaaaatgaaggccagggctttctcaatg
aaccaaatgaacgacaccactagcaaggcccctggtttgtcggctacagaggaggtggtc
gccgaggttgatgaagactggcacaatgtggaacagcctgtggagagtaatagtaagagt
gcaaggtccccagagagaaggcgttacgaccggccccgcgataagttgccctcctcttcc
tcttcctctcaccagatgagtcccctgagcaaagtcagtgacaagaatcgaatgtcgcac
tcaccccacggcaagtctccgcgcagccgttccccgcacagccggcggtcgtcccctcac
aggaagtccccctccagttccagccacaaatactcatcgtcatcgcaacagcaacagttg
tcatcgatggacgactttgccgtggagctggcccgggagcgtgaacggcagaggcgcgaa
agggagcgggaacgcaacggtcgacataaagaccaccaccaccaacagcagcagcagcag
caacaacaacaacaacaacaacaacatgacctgactgactaa
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