Octopus bimaculoides (California two-spot octopus): 106867644
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Entry
106867644 CDS
T04127
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106867644
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106867644
Spliceosome [BR:
obi03041
]
Complex C
Other components
Complex C specific factors
106867644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_19
AAA_22
Cas3-like_C_2
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
106867644
NCBI-ProteinID:
XP_014768060
UniProt:
A0A0L8HZG3
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All DBs
Position
1:197853303..197859059
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AA seq
696 aa
AA seq
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MATFKPKFWRPGDEDPRSILQEERVYESGEQYAVYNPYLSMTIQQQRQKLPVFALRTHIL
YLVETYPVVVIVGHTGCGKSTQVPQYLLEAGWTGQRYKIAVCQPRRVAAVTLAKRVSEER
GTMLGDEIGFHVRFDQCYDAETTSIIFLTDGMLIREIFSDPLLTKYSVIMVDEAHERTQH
TDILIGLLKKILARRKDLRVIIASATLDAAEVKNFFNTNLTDNPKLDTATILSIEGRGYP
VDIHYAIDPLPNYVQATVETILKIHHNEVPGDILAFLTGQDEVETVVHQLIQEARRMGQD
VKMKMKVLRMYGSLPASEQLKVFDRTAKTTRKIVVATNIAETSVTIHGIVFVVDCGFVKL
RAYNAETGVESLITVPISQASADQRAGRAGRVRHGKTFRLYPESEYNKLSAATVPEIQRS
ELSPVILQLKALGVKNVLRFNFLSAPPAMNMLHSFELLYALSALDEDGDLTTPLGMNMAE
FPLSPMFAKMLLTAADFECTEEALTIASLMQIENVFVSPSNEKKAAERAKTKFSVHEGDH
ITMVNVYNAFLEHNKSSQWCAENYLNLKGLNRACNIRNQLKQMLKKFKVQLVSCGDNTEL
LQRCIAAAFFANAARLHYDGTYRTIRNNHCLHIHPTSVLYTDTPPQWVVFNEVIQTNKDY
MRDITTIRPGWLCELAPHFFQFGTESEIAKKRAKFT
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattcaaaccaaagttttggcgccctggagatgaagatccgagatctatcctc
caagaggaacgagtctatgaaagtggagagcaatatgctgtctataatccttatttatcg
atgacaattcaacaacagcggcaaaagctgcccgttttcgctttacgaactcacattctt
tatttggtggaaacgtatcctgttgttgttattgtcggtcataccggttgtggtaaaagt
acccaggtaccacagtatctgcttgaggctggttggactggacaacgttacaaaatcgct
gtttgccaaccaaggcgtgtggccgctgttactttggccaaaagagtctcagaagaacga
ggaacaatgctcggtgatgagattggttttcatgttaggtttgaccagtgttatgatgct
gagacgacaagtatcatctttcttactgacggaatgctgattcgagagattttctctgac
cctctgctcacaaagtacagtgtgattatggtagacgaagctcatgaacgcactcaacac
acagatatcctaattgggctgctgaagaagattttagctcgacgcaaagatcttcgtgtc
atcattgcttctgcgacactcgatgctgccgaagttaaaaacttcttcaataccaattta
acagataatcccaagttggacactgcaacaattcttagtattgaaggacgaggttaccct
gtggacatccattatgccattgaccctctgccaaattacgtccaggcaactgtggagaca
atcctaaagattcaccataatgaagtccctggggacattttggctttcctcacaggtcaa
gatgaagttgaaactgttgttcatcaattgatacaagaagctagaagaatgggccaagat
gtcaagatgaaaatgaaagtattacgaatgtatggaagcctaccagcatcagaacagcta
aaggtgtttgacagaacagcaaaaaccacacgcaaaattgtggttgctacaaatattgct
gagacttctgtcacaattcatggcattgtttttgttgtggattgtggttttgtcaaactg
cgtgcttataacgcagaaactggtgttgaaagtttaatcactgtaccaatatctcaagca
tctgcagaccaaagagctggccgtgctggccgtgtccgccatggaaaaacattccgactc
tatccagaatcagagtacaataagctgtcagcagcaacagttccagaaatccaacgcagt
gagctttcccctgtgatattacagttaaaggccctgggtgtgaaaaatgtacttcggttc
aattttctctctgctccacctgcaatgaatatgttgcacagctttgaactgctctacgca
ctttcagcattggatgaagatggagacttaacaacaccactcggtatgaacatggcggaa
tttcctctctcaccaatgtttgcgaaaatgcttttaacagctgctgactttgaatgcaca
gaagaagcattaaccattgcatctctgatgcagattgaaaatgtttttgtgtctccaagt
aacgaaaagaaagctgccgaacgagctaaaacgaaatttagcgtccacgaaggggaccat
attactatggtcaatgtttataatgctttccttgaacacaataaaagcagccaatggtgt
gcagagaattatttaaacttgaagggactgaatcgggcttgcaacattcgcaaccaactg
aaacaaatgctaaaaaagttcaaagttcagttagtgtcatgtggtgataacacggaattg
ttgcagcgatgcatagcagcagctttctttgcaaatgctgctcgtttacattatgatggc
acttatcggacaattcgaaacaaccattgtttacacattcacccaacgtccgtcctttac
acagacacaccacctcagtgggtggtgtttaatgaagtcatacaaacgaacaaggactac
atgcgagacatcacaaccatccgaccagggtggctctgtgaattggccccacatttcttt
cagtttggtacagaatcagaaattgccaaaaaaagggccaaatttacctga
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