Octopus bimaculoides (California two-spot octopus): 106867716
Help
Entry
106867716 CDS
T04127
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106867716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106867716
03041 Spliceosome [BR:
obi03041
]
106867716
03036 Chromosome and associated proteins [BR:
obi03036
]
106867716
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106867716
Spliceosome [BR:
obi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106867716
Complex B
106867716
Complex C
U2 SnRNP specific factors
106867716
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106867716
TFTC complex
106867716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
106867716
NCBI-ProteinID:
XP_014768160
UniProt:
A0A0L8HYX4
LinkDB
All DBs
Position
1:complement(130215847..130275913)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGITQAVHGNFSGTKQQEVIVSRGKILELLRPDPNTGKVYTILTVEIFG
VIRALLPFRLTGGTKDYIIVGSDSGRIVILEYLPSKNAFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMTGAVEKQKLVYILNRDAQARLTISSPLEAHKSSTLVYHMVGVDVGFENP
TFACLEIDYEEADYDPTGEAALQTHQMLTYYELDLGLNHVVRKYSEQLEEHANSLIAVPG
GSDGPSGCLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSASHKTKSMFF
FLAQTEQGDIFKITLEIDEDMVTEIRLKYFDTVPVATSMCVLKTGFLFVASEFGNHFLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFSPRLLKNLVMVDEMDSLSPIMSCQIADLANEDT
PQLYTLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKKNIEDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSQLGDDALVQIYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTEKKEMSADVVCMGLGRVPSGEQ
RSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPAPPEALCIVEMGNAETIEETREGGSQ
GGLFLNIGLQNGVLLRTVLDTVTGDLSDTRTRYLGSRPVKLFRITMQGSEAVLAMSSRSW
LSYTYQNRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSWP
LQYTPRKFIIHQDSNNLIIIETDHNAYTESTKQQRKQQMAEEMIEAAQEDERQLAAKMAD
AFLEEDLPENTFGAAKAGTGMWASVVRIINPISGETLDKVSLDQNEAAHSIALVRFSCAS
DDMHVLVGTAKELVLNPRSLSGGFIYCYKLLNSGEKLEFVHKTVVDELPGAIAAFQGRAL
IGTGRYLRIYDLGKKKLLRKCENKRIPNFIMSILTLGHRIVVSDIQESINFVRYKRPENQ
LIVFADDTTPRWVTSSCLLDYDTVATADKFGNITVIRLPPDVCDEVEEDPTGNKALWDRG
LLNGASQKADVIANFHVGEVVTSLQKATLIPGGSESLVYTTLSGSIGMLVPFTSHEDHDF
FQHLEMYMRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEMFNSMDVGKQKGVCDDLDRT
PSEVSKKLEDTRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaatttgacattacaacgagcaacaggaataactcaagctgtccatggt
aatttctctggaactaaacagcaggaagttattgtatcgaggggcaaaatcttagagctt
ttgcgccctgaccctaacacagggaaagtctacactattttaactgttgagatatttggt
gtgataagagctttgttaccttttcgacttacaggtggaactaaagattatattattgtt
ggatctgattctggaaggattgtcatccttgaatatcttccatctaaaaatgcatttgaa
aagatccaccaagagacatttggcaagagtggttgtcggaggattgtccctggtcagttc
ttggctgttgatccaaagggacgtgcagtaatgacaggtgctgtggagaaacagaagtta
gtatatatcctgaacagagatgctcaagctcgactaacaatttcttctcctcttgaagcc
cacaaatccagcacactcgtctaccacatggttggagttgatgtaggatttgaaaatcca
acatttgcttgtcttgagatagattatgaagaagctgactatgacccaacaggggaagct
gcactccagactcatcagatgcttacttattatgaattggatcttggtctcaaccatgtt
gtaaggaaatattctgaacaacttgaagaacatgctaattctctgattgctgtacctgga
ggcagtgatggtccaagtggttgcttaatttgttctgaaaactatatcacatataagaac
tttggagatcagcctgacattagatgtccaattccacggagacgaaatgaccttgatgac
cccgaacgaggaatgatatttgtatgcagtgcttctcacaaaacaaagtcaatgttcttc
ttcttggcccagacagaacagggagacatttttaaaataactctagaaattgatgaagat
atggtcactgaaatacgcctcaagtattttgacactgttcctgtagcaaccagtatgtgt
gtcttaaagactggatttctttttgttgcttcagagtttggcaatcatttcctttaccag
attgctcatcttggtgatgatgatgatgaaccagaattcagcagtgccatgcctctagaa
gaaggagacactttctttttctctcctcgtctactgaagaatcttgtcatggttgatgaa
atggatagtttgtctcctattatgtcctgtcaaattgctgatcttgcaaatgaagacact
ccccagttgtatacattgtgtggtcgaggtcctcgctcctctctccgagttttaagacat
ggtttggaggtttctgaaatggctgtctcagaacttccaggtaatccaaatgctgtatgg
acagttaaaaagaatattgaagatgaatatgatgcttatatcatagtatctttcgtcaat
gctaccctggtattgtcaattggagaaacagttgaagaagtcacagattctggttttctt
ggtacaacccctaccttgtcttgttcccagctaggagatgatgcacttgtacagatttat
cctgatggaattcgtcatattcgagcagacaagcgtgtcaatgagtggaagacaccaggc
aagaaaactattgtaaaatgtgctgttaaccagcgccaagttgttattgcattgactgga
ggagaattggtatattttgaaatggacccaacaggtcagttgaatgaatatacagagaag
aaagaaatgtcagcggatgttgtgtgtatgggtcttggccgagttccatctggggagcag
agatcccgattccttgctgttggtttggctgataacacagtccgcattatttcattggat
ccctctgactgtctttcaccactgagtatgcaagctttacctgctcctcctgaggccttg
tgtattgtagaaatgggtaatgcagaaactattgaagaaacacgagaaggtggatcacag
ggtggacttttcctcaatattggcttacagaatggtgtattgctgcgtaccgtgttagac
acagtcactggagacttatcagacactagaaccagatatttgggttcccgtcctgtcaaa
ctatttagaatcactatgcaagggtcagaagctgttttggccatgtctagcaggtcctgg
ttaagttacacttaccaaaatcgattccatcttacaccgctttcatacgaaaccttggaa
tatgcctctggatttgcctctgaacaatgtccagaaggtattgtagctatttcaaccaac
actctcaggattttagctttggagaaactaggtgctgtctttaatcaagtttcatggcca
ttgcagtacactccaagaaaatttatcattcatcaagattccaacaaccttatcatcatt
gaaacagaccataatgcttatactgaatcaacaaaacagcaacgcaaacaacaaatggct
gaggagatgatagaagctgcacaagaagacgagcgacaactagctgctaaaatggctgat
gctttcttggaagaagatcttcctgagaacacttttggtgctgccaaggctggtactggt
atgtgggcgtctgttgttcgtatcattaacccaatttcaggagagactttagataaagta
tctcttgatcagaatgaagctgcacacagcattgcccttgtgcggttttcatgcgctagt
gatgacatgcatgtgcttgtaggaacagcaaaggaattagtactgaacccacgttctctc
agtgggggttttatctattgttacaaacttctgaattccggagagaagctagagtttgta
cataagactgtggtcgatgagcttcctggtgccattgctgcattccaaggccgagcctta
ataggaactggccgatatcttcgtatatatgatcttgggaagaaaaagctgctcagaaaa
tgtgaaaataagcgtattccaaactttatcatgagtattttaacattgggtcaccggatt
gttgtctctgacatccaagaaagtattaattttgtccgttacaaacgacctgagaaccaa
ctaattgtatttgctgatgacacgacacctcgttgggtaaccagttcatgtctacttgac
tacgatactgtggcaactgcagataaatttggtaacatcacagtgattcgtttacctcct
gatgtctgtgatgaagttgaagaagatccaactggtaacaaagcactttgggatcgaggt
ttacttaatggtgcttctcaaaaggctgatgtcattgctaactttcatgttggtgaagta
gtgacatctttacagaaggctaccctcatccctggtggatcagagtccttggtctatacc
acattatctggcagtattggaatgctggttcctttcacttcacatgaggaccatgacttt
ttccagcatttagagatgtacatgcgctcagaacatcctccactttgtggtcgagatcat
ctttctttccgttcatattacttccctgtcaagaatgtcattgatggcgatctctgtgag
atgttcaactccatggatgttggaaagcaaaagggtgtttgtgacgatttagaccgtacc
cctagtgaggtctctaagaaattggaggataccagaactcgttatgccttctag
DBGET
integrated database retrieval system
