Octopus bimaculoides (California two-spot octopus): 106868054
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Entry
106868054 CDS
T04127
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106868054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106868054
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106868054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
106868054
NCBI-ProteinID:
XP_014768650
UniProt:
A0A0L8HX88
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All DBs
Position
3:complement(71802573..71841841)
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AA seq
922 aa
AA seq
DB search
MAVQSSKELQLDSIQEQGFISFFRKLPEKSSATLRIFDRTDYYTVHGSDALFVAKEVFKT
LGVVKYLGSGSNKMESVVLSKLNFESLVRDLLLVKAYRVELYRSKSKNEWSLDFKASPGN
LVQFEDILFTNCEMSCATGVLAVKIGTVSGQQMVGTALVDLTSHKMEVCEFTDNDQFSNL
EALIVQLGPKECVVCTSEINDSAWLKQVITRSGLLITEKKKGDFQSKDIVQDLNRLLKFQ
KEDQQNSAALPELDNTLAMAALSSLVKYLELLSDEGYFGQFKLSTFDLKQYLKLDAAAVK
ALNIQPNPYEGGNKNQSIFGLLNKCRTAPGQRLLSQWIKQPLVDINKIEERLDMVEAFIN
NTELRQSLHEDQLKKIPDYQRLSKKFYRKKANLQDCYRVYHSLSKLPYLVETLEKDDGPH
KNLVMQVFSNPIKELLMDFTKFEEMIESTLDMEQVENHEFLIKPEFDDVLTSLREKLDEV
EADIKSQLNKVARDLGVEPQKTLKLESNSQLGYFFRVTRKEEKLIRNNKTYLTIDTNKNG
VRFHNTGLRQLNEEFVKLRQDYAEQQKTVVAGIIDIAAGYVEPMIQMNDILAQLDVMVCF
AHVSANAPIPYVRPKLLEKGSGIIRLKEARHPCLEMQDDVSFIPNDIEFEKKKRMFHIIT
GPNMGGKSTYIRSVGCIVLLAQLGCFVPCNEAEISIVDSILARVGAGDSQLKGVSTFMAE
MLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAIAEYIATKIKAFCLFATHFHELT
LLADEVSTVINSHVTALTCNDTLTLLYKVKHGVCDQSFGIHVAELAHFPKHVIEFAKNKA
KELEDFQSVDLQGTDMAGDDEPAVKKRKSEKQEGERIIEDFLKSVKNLPLDTLTNEQLKS
EISNLKAGVESKNNLYIKDILS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcaaagcagtaaagaactccagttagacagtatccaggaacagggttttata
tctttctttcgaaaattaccggagaagtccagtgcgacgcttaggatatttgatcggaca
gattactatacagtccatggcagcgatgcattatttgtggctaaagaagtattcaaaacc
ttgggtgtcgtgaaatatcttggttctggctcaaacaagatggaatctgtggtattaagc
aaattgaactttgagtcacttgtacgtgatttgttacttgtcaaagcttatagagtggag
ctttacagatccaaaagtaaaaatgaatggtcattggatttcaaggcttcacctggaaac
ctggttcagtttgaagatattttgttcactaattgtgaaatgtcatgtgctactggagtt
ttagctgttaagattggtacagtcagtggccaacagatggttggaacagctcttgtggac
ctgacatcccacaaaatggaggtctgtgagttcactgacaatgatcagttttcaaatttg
gaggctctcattgttcagttgggaccaaaagagtgtgttgtgtgtactagtgaaattaat
gactctgcctggctaaaacaagttattacccgaagtggacttttgattactgaaaaaaag
aaaggtgatttccaaagcaaagatatagtgcaagacttgaacaggctacttaagttccag
aaagaagaccaacagaacagtgctgctttacctgagcttgataacactcttgctatggca
gcattgtcttccctagtcaagtatttggagttactttctgatgagggctactttggccaa
ttcaaattgtctacattcgatctgaagcagtatttgaagttggatgcagctgcagtgaaa
gctttgaacattcagcctaatccttatgaaggtggaaacaagaatcagagtatttttggc
ttattaaacaagtgtcgtacagcaccaggtcaacggctcctaagtcagtggattaaacaa
cctttggtagacatcaacaaaatagaagagaggcttgatatggtagaagcatttatcaac
aacactgagttacgtcagtcactccatgaagaccagttaaagaagattccggattaccag
cgtttatccaaaaaattttatcgtaaaaaggctaatcttcaggattgctaccgtgtgtac
cattccctgagtaagttgccatatcttgtggaaactctggagaaggatgatggtccacat
aaaaatcttgtgatgcaggtctttagtaatccaatcaaggaattactgatggatttcact
aaatttgaagagatgattgaaagtacattggatatggaacaagtagaaaatcatgaattt
ctaattaaacctgaatttgatgatgttctaacatctctacgagaaaaacttgatgaagtt
gaggctgatattaagtcccagttaaataaggtggcaagggacctgggagttgaacctcag
aaaacactgaagcttgaatcaaacagtcaattaggttactttttccgagtcactcgaaag
gaggagaaactaattcgaaataacaagacctatcttaccattgacaccaataaaaatggt
gtgaggttccacaacactggtttgcggcagttgaatgaagagtttgtaaaactgagacaa
gattatgctgaacaacagaaaactgttgttgctggaatcattgatattgctgctggttat
gttgaacctatgatacagatgaatgatattcttgcacagctggatgttatggtttgtttt
gcccatgtatctgctaatgcaccaataccttatgtacgacctaaacttttggagaaagga
tctggaattatccgactgaaggaggcaagacatccatgtttggaaatgcaagatgatgtt
tctttcattcccaatgatattgaatttgaaaaaaagaaacggatgttccacattattaca
ggacccaatatgggaggaaaatcaacatatattagatctgttggctgtattgtactgtta
gctcagcttggttgttttgtgccttgtaatgaagcagagatttccattgtagacagtatt
ttggcacgtgttggtgctggagatagtcaactaaaaggtgtatctacatttatggcagaa
atgctggagactgcatcaattctcaggtctgcatcagaaaactctttgatcataatagat
gagcttggaagaggtacctcaacctatgatggatttggtttagcttgggccattgcagaa
tacattgctacaaaaatcaaagccttttgtctttttgcaactcattttcatgaactaaca
ttgttagctgatgaagtttctacagtcattaactcgcatgtaacagctctgacttgcaat
gatacactgactcttttatacaaagttaaacatggagtttgtgaccagagttttggaatt
catgtggctgaacttgctcattttccaaaacatgttatagagtttgccaagaacaaagcc
aaagagctggaagattttcaaagtgttgatttgcagggtactgacatggctggtgatgat
gagccagctgtgaaaaaacggaagtctgagaaacaggaaggtgaacgaattattgaagat
ttcctgaaaagtgtgaagaatttgcctttggatactcttacaaatgaacaacttaaaagt
gaaataagcaacctaaaagctggagtagaatctaaaaataacctgtatataaaagacatt
ctctcttaa
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