Octopus bimaculoides (California two-spot octopus): 106868227
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Entry
106868227 CDS
T04127
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106868227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106868227
03016 Transfer RNA biogenesis [BR:
obi03016
]
106868227
Enzymes [BR:
obi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
106868227
Messenger RNA biogenesis [BR:
obi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
106868227
Transfer RNA biogenesis [BR:
obi03016
]
Prokaryotic type
tRNA degradation factors
106868227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Motif
Other DBs
NCBI-GeneID:
106868227
NCBI-ProteinID:
XP_014768879
LinkDB
All DBs
Position
4:complement(136947652..137156188)
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AA seq
605 aa
AA seq
DB search
MAVSAGQARVAFIRFYKHTHYVVSGGFLIKSFTNQCRWSSNSSTTAWQKRSKHGEIDVDI
GMRKLKITTGKFARFADGAAMVELGGTAVLVTAVCSEKVSSSGFMPLTVDFRQKAAAAGR
IPTNYLRREIGSTQHEILTSRMIDRSLRPLFPQGFCNETQLMCNLLSVDGDNNPDVLSIN
AASAALSLSSIPWNGPVGAVRVGLVNDEVTINPTRRQVSESTLNLIVACIDQYKVVMLES
SSDNILQQDFMRAIKQGVKETQLIIQAIKDLQKHHGCEKRQFTPPSALEEDILEAIKSMS
NLRIKEVFQDPRHDKISRDEAISVIRSDVLEKVKETYPDTEQGALVQSFGAICKEIFRNQ
ILDTNTRCDGRGLTDVRDIHCQVNLFQPLHGSALFQRGQTQVFCTVAFDSLESAMKLDPA
SDIKDKNFMLHYEFPPYATNETGRLSSIGRREIGHGYLAEKGLQAIIPEEYPFTIRLTSE
VLESNGSSSMASVCGGSLALMDAGVPIKEPVAGVAMGLVARINEAKSNVIEDYRIMTDIL
GIEDYMGDMDFKLAGTRKGITALQVIFRFCAQHDFSQLYLLVVSSVMTKLFFTYKHIANA
MLSPK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccgcggggcaagcacgtgttgccttcattcgtttctataaacacacacat
tacgtggtcagcggtggcttcttaatcaaatcatttacaaaccagtgtcgatggtcttcg
aatagttcgacgactgcttggcaaaaacgtagtaaacatggagaaatagatgtggacatc
gggatgaggaaattaaaaataactacgggtaaatttgccagatttgcagatggcgctgca
atggttgagcttggtggcacagcggtactagtaacagcagtgtgttcagaaaaggtctca
tcttctggatttatgccactaacagtggatttccgacagaaagctgcagcagctggtcgt
atacctaccaattatttacgaagggaaattggtagcacgcaacacgagattttaacaagt
agaatgatagatcgttccctccgaccattatttcctcaaggattttgcaatgaaactcag
ctgatgtgtaatttactgtcagttgatggggataacaatcccgatgtccttagcattaat
gcagcttctgcagctttgagtctttcaagtattccatggaatggaccagttggtgctgtt
cgtgtcgggttagtaaatgatgaagttactatcaaccccaccagacgacaagtttctgaa
agtactcttaatctgatagtagcctgtatagatcaatacaaagttgtgatgctggaatca
agttctgacaatattctgcaacaggattttatgcgtgccataaaacagggtgtgaaagaa
acccagcttattatccaagctattaaagatttacagaagcaccatgggtgtgagaagagg
caatttactccaccatcagcattagaagaggatattttagaggccatcaaaagtatgtct
aacctacggattaaagaagtttttcaagatcccaggcatgacaaaatatcacgagatgaa
gctatcagtgtaattagaagtgatgttctggagaaagtgaaagaaacataccctgatact
gaacagggtgctctggtgcagtcttttggtgctatatgcaaggagatctttagaaatcaa
attcttgacacaaatacaaggtgtgatggccgaggtttgactgacgtcagagatatccat
tgtcaagttaatttgtttcaaccattgcatggatcagctttatttcaacgaggtcaaaca
caggtgttctgtacagtagcttttgactcattggaatcagccatgaaattggatccagct
tccgatattaaagataagaacttcatgttgcattatgagtttccaccatatgccacgaat
gaaactggtcggctatctagcattggaagacgagaaatcggacatggttacttggctgaa
aaagggttacaggctatcataccggaagaatacccctttaccatacgtcttacctcagaa
gtcttggagtcaaatggttcctcttctatggcttctgtatgtggtggcagccttgcacta
atggatgccggtgtaccaattaaggaacccgtggctggagtcgcaatgggtcttgtcgca
aggataaatgaagcaaaatccaatgtaattgaagattataggatcatgacagatattttg
ggtattgaagactacatgggtgacatggacttcaagttagctggtacaaggaaaggaatt
actgctctacaggtaatattccgtttctgcgctcagcatgacttttctcagttgtatctt
ctcgttgtttcttctgtcatgacaaaactattctttacttataaacacattgctaatgcc
atgttgtctcctaagtga
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