Octopus bimaculoides (California two-spot octopus): 106868302
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Entry
106868302 CDS
T04127
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106868302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106868302
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106868302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_VPS8
NBCH_WD40
VPS11_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
106868302
NCBI-ProteinID:
XP_014768980
UniProt:
A0A0L8IFQ0
LinkDB
All DBs
Position
8:96160436..96178949
Genome browser
AA seq
894 aa
AA seq
DB search
MSASKIFTGYRALGYVSNHVPLVTRYQEKVKEHYVITCVGKAFHTYNCSKLGISNISDTH
PDEISCLAANHHQVFTACKNIIYCFLRGQQVIRKYIGHKSAVHILLTFAAHLISVDEDSF
VRIWNIKNKELYLEMSFDNKQFQVTSAVHPVTYLNKVLFGSAQGTLQLWNLKSNKLIYTF
PGWNSKVTVLEQAPAVDVIAVGLEDGRIIVHNIRYDESVMKFAQTWAPVTTISFRSDGHP
IMVSGSASGHMAVWDLEENRIKCQVRDAHRSSITGMYCLPSEPLMVTSSGDNTLKVWIFD
MPDGSPRLLRKREGHSSPPLKIRYYGENGENILSAGLDSTLRSFSLVHDKYNKSLGQASY
YKKKSKREKLKDKYVMSPIFDFAAEVRRESDWDNIVACHRGSHLVTTWSYLRSTMGDRKF
DVYKQRKEAKDGTDITATSVGITSCGNYCLLGYSSGHVDVFNIQSGIYRGSYGEERCHDG
AVHGIAVDANNQITVTAGADGTLKFWKFKSKQLLKELKLDSYISKILLHRESSLLAVSLN
NLSVSIVDLQTKNVIRVFSDHQHQITDMTFSPDARWLITSSMDSLVRTWDLPSGRLIDCF
EVDTPVSSVSMSPTGIFLATSHIDDIGIYLWSNKSLYQQTSLSALSDDFVPKLISAPTTG
YAAEASSFSEDEDEEPIDDDDESPFKSPDQISNELITLSLMPNSRWKNLLNLDIIRLRNK
PKQPPKKPKAAPFFLPTIPGNDIKFAVEKEKNQETTSRISVGLKTHLSETGKLLQNANNE
DDYLKILDAFKEMGPSAIDLEIRGFGVEDGGSEILMYQFLKFIEYLLDSRKNYELAQSYL
GLFLQIHFTEIGTNVKLCELIKQLHQQHVQVWHELQRQFAQTNCLIDYLRAANY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgagcaaaatcttcacgggttaccgtgctttgggttatgttagcaatcatgta
ccattagtaaccagataccaggagaaggtgaaagaacattatgttataacctgtgtcggg
aaggcctttcatacatacaattgttccaagctcgggatatctaatatcagtgacacacat
cctgatgagatctcatgccttgctgctaatcatcatcaagtatttacagcctgtaaaaat
attatctactgcttcctacggggacagcaggttattagaaaatatataggccacaaaagc
gctgttcatattttactgacatttgctgcacatttgatatctgttgatgaagatagcttt
gtacgaatttggaatatcaaaaataaggagctttacttggaaatgtcttttgacaataaa
caatttcaagttacttcagcggttcatcctgtcacataccttaacaaagtattatttgga
agtgcacaaggcactctacaactttggaacttaaaatcaaataaacttatttatacattc
cctgggtggaattctaaagttaccgttcttgagcaggctcctgcagttgatgtcatagca
gttggcctggaggatggtcgcattattgtacataatatccgttatgatgagtctgtgatg
aagtttgctcaaacctgggctcctgttaccactatatccttccgatcagatggtcatcct
ataatggtcagtggtagtgcgtctggacatatggcagtgtgggaccttgaagaaaaccgt
atcaaatgccaagtccgtgatgctcaccgttcgtctataactgggatgtattgcttgcct
tctgaacccttaatggtgacctcttcaggtgacaacactctcaaggtctggatttttgat
atgcctgatggaagtcctcgtttactgaggaagagggagggccatagttcaccaccgctc
aaaatacgctattatggagaaaatggtgaaaatatacttagtgcaggtcttgacagtact
ttgcgatccttctctcttgtacatgataaatacaataaaagtttgggacaagcatcttac
tacaagaaaaaatccaaacgtgaaaaattaaaagataaatatgtaatgtcaccaatcttt
gattttgctgcagaggttcggcgtgagagtgattgggataacattgtggcctgtcatcga
ggaagtcatttggtgacaacatggagctacctgcgttctaccatgggtgaccgtaaattt
gatgtgtacaaacaaagaaaagaagccaaggatggtacagatatcacagccacaagtgtc
ggaatcacttcatgtggtaattactgcctgcttggttacagttctggccatgtggacgta
ttcaacatacagtccggaatttaccgaggatcatatggtgaagagagatgtcatgacggt
gctgtgcatggcattgctgtcgatgccaataaccaaatcactgtcacagctggagcagat
ggaacattgaagttctggaagttcaagtcaaaacaacttttgaaagaactgaaactcgac
agctatatttccaaaattttacttcatcgtgaaagttccttgttagcagtttctctcaac
aacctctcagtctcaatagtagatttacagacgaagaatgtgattcgagttttctctgac
caccaacatcaaataacagacatgactttcagtccagatgctcgatggttgataacatct
tcaatggattcacttgtccgaacatgggacctgccatcaggaaggttgattgattgcttt
gaagtggacacacctgtatcttctgtgagtatgtcaccaactggaatattcttggccaca
tcccatattgatgatattggtatctacctttggtctaacaaatcactctatcaacagaca
tcactctctgcattatctgacgattttgtaccaaagttaatttcggcaccaacaactgga
tatgcagcagaagcttcttcattttctgaagatgaagatgaggaacccatagatgatgat
gatgaatctcccttcaagtcacctgaccaaattagtaacgaactcatcacactctctttg
atgccaaactctcggtggaagaatttattgaacttggatattatccgattgagaaataag
ccaaaacaaccgcccaaaaaaccgaaagcagcaccatttttcttacccacaattcctggc
aatgacatcaaatttgctgttgagaaagaaaaaaatcaggagacaacgtcccgaatatct
gtagggttgaaaacacatttatcagagacaggaaaacttttacagaatgcaaacaatgaa
gatgattacttaaaaatattggatgctttcaaagaaatgggaccttctgctattgatcta
gaaattcgaggattcggtgtggaagatggtggttcggagattcttatgtaccagtttctc
aagtttatagaatatcttttagactccagaaagaattatgaacttgcacagtcttatttg
gggttgtttctacagattcatttcactgaaattggaacaaatgttaaactgtgtgaactt
ataaaacaacttcatcagcaacatgtacaggtttggcatgaattacaaagacaatttgca
caaacgaattgcttaattgactatttacgtgctgctaattactag
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