Octopus bimaculoides (California two-spot octopus): 106868346
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Entry
106868346 CDS
T04127
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106868346
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106868346
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Ortholog
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GFIT
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NCBI-GeneID:
106868346
NCBI-ProteinID:
XP_052823993
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Position
5:29238947..29263637
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AA seq
509 aa
AA seq
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MSDPLERGDRGGRNRRRRRAGRKDFFQERGDRDLSDTGNLSSLTSKPPIILAKPHSTDLL
TTMNPTSSSSLSGNSMAGVKMGEKQIVVLKAREDSTSSSTSVGNSCCTSSGIGLGASLSS
GRSSTPASSLHNINAAVSSDLSSHSTSPYQMHRNTQLSSMDECQNRLAPLPEMPRCIKLV
DDSMHWCDTGMEVSLPIIIIPPRSTLPFILSCVCVYIFIYNEVIDAFLHLFAFRNFVFQP
QSKEIREVGSHQTSGVDMFVTNDRVILLDTQPVLSASVLDMMIHHDKKYPAEYSTAENCM
EMQSLQLAAFMMTVCNVLLVVQDWFTDINFLRFLLTAEMLKPSTPANSHDDTSVQENTAD
YYPQIVFVQNKAVRDDFSVETYRAKQCLLSKVLENSKLKYKDAVTLATGELLPGLNNRNI
TTGVNLFLLPHMDNQKVEADSILTFLPEYRGYPSFNRLLQSLRNQVFACQRRLLTHTILS
EKNWFHYAARTWDTVKKSTLMAEYNRLLP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccgcttgagcgcggcgatcgaggaggacgaaacagacgaaggcgccgagct
ggacgtaaggacttttttcaagaacgtggagaccgagacctatcagatactggaaatctt
agttctttaacctctaaaccgccaataatcttggctaaaccacattctactgatttactt
actacaatgaatcctacttcttcttcatccttgagtggaaacagtatggctggagtgaag
atgggtgaaaaacaaattgtagttttgaaagcccgtgaagacagcaccagtagcagtaca
agtgtaggaaatagctgctgtactagttcaggtattggtttaggagcctctctcagttca
ggacgctccagcacaccagcttcgagtctacataacatcaatgctgctgtctccagtgat
ctgtcatctcattcaacatctccttatcagatgcatcgaaatactcagctttcctctatg
gatgagtgtcagaaccgacttgctcctctcccagaaatgccaagatgcataaagttggtt
gatgactcaatgcattggtgtgacactggaatggaagtaagtcttcccattattattatt
ccaccaaggtcaactttgcctttcatcctttcgtgtgtttgtgtgtatatatttatatac
aatgaggttattgatgcatttctccatttatttgcttttagaaactttgtgttccagcct
cagagcaaagaaatacgagaagttggtagtcaccagacttcaggagttgatatgtttgtc
accaatgaccgagttatcttacttgacacccagcctgtcctaagtgcttctgtcttggac
atgatgatacaccatgacaagaagtacccagctgaatacagcactgctgaaaattgtatg
gaaatgcagtcactgcagttagctgcgtttatgatgaccgtatgcaatgtacttctcgta
gtccaagactggtttactgatatcaacttcctcagattcttgttaactgccgaaatgctt
aaaccttcaactcctgctaattcccatgatgacacatcagttcaagagaatactgcagac
tattatccacagattgtgtttgtccagaataaggcagtaagagatgatttcagtgtagaa
acttatcgtgccaaacaatgtttactatccaaagtgcttgagaattccaagcttaagtac
aaagacgctgtgactttggccactggagagttactgcctgggttaaataaccgaaatatc
accacaggggtcaatttatttttgctacctcatatggacaatcagaaagttgaagctgat
tcaatcttaacgtttttacccgaatatcgtggctacccaagttttaataggctgctgcag
tcccttcgtaaccaagtatttgcttgtcaacgtcgtctgctgacacacactattctctct
gagaaaaactggtttcattatgcagcaagaacttgggatactgtgaaaaaatctactctg
atggccgagtacaaccgcttgttaccgtga
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