Octopus bimaculoides (California two-spot octopus): 106868386
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Entry
106868386 CDS
T04127
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106868386
03009 Ribosome biogenesis [BR:
obi03009
]
106868386
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106868386
Spliceosome [BR:
obi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106868386
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
Pre-60S particles
Helicases
106868386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
106868386
NCBI-ProteinID:
XP_014769102
LinkDB
All DBs
Position
5:complement(17624625..17650917)
Genome browser
AA seq
703 aa
AA seq
DB search
MVSVPDDLGFIKTITDDDVIEFNDDTSESDEDQVTPLSKEKRKKKRTNEFNNNFQFDISF
KDDAIFDMDFALRHAKRKKLEVTSLDEKIIQIRRQKKKATNTKEKSENITDDWNEDDDDS
FDEEETNMTDVIRDKGRKKKSKKKIEDENKVKFEEDIDFYDKDITFQEMNLSRPVMKALA
SMKFDKPMPIQAATIPVALLGRDICACAVTGSGKTAAFMLPIIERLLYKPKNSTCTRVLV
LLPTRELAVQVHQVARQLAQFTNIDMCIAAGGLDLKMQEAALRKGPDVVIATPGRLIDHL
HNAPHFSLHTVEILVLDEADRMLDDFFAEQMKEIIRLCSRQRQTMLFSATMTDEVQDLAK
VSLDKPIKVFINENTDVAFGLRQEFIRIRPTREGDREAIVTALVSRIFCNHCIIFVQTKK
QAHRMHIIFGLCGINVGELHGNLSQAQRLEALKRFKEARIDVLLATDLAARGLDIEGVKT
VINLTMPSTIKHYVHRVGRTARAGKKGRAVSLVGEKERSLLKEIVKKAHDPVKARVVPQE
VINKYRDRIEQLEDDIKAVEKIEKEEKEIQLSEMQLSQINNKLEGTDEQNRKWFQSKKEK
IKEKLNGRLSKMSEEPVSKKSKQLQGVRKSKNQTPVSTENRIEFEVHKAQLCAARFSKKF
SKAKRIKACPDTSKKGIPVHYIYGLAELFEYPRKCLGVISYGS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgttccagatgatcttggttttataaagacaataactgatgatgatgtcatt
gaatttaatgacgatacatcagagagtgatgaagatcaagtcacacctctttctaaagaa
aaaaggaagaagaaaagaactaatgaatttaacaacaacttccagtttgacatatcattt
aaagatgatgcaatattcgatatggactttgctttacgacatgcaaaacgaaagaaatta
gaagttacatcacttgatgaaaaaatcatacagatccgtcggcaaaaaaagaaagcgaca
aatactaaggaaaaatcagaaaatattacagacgattggaacgaagacgatgacgacagt
tttgatgaagaagaaactaatatgactgatgtaatcagagacaaaggtagaaaaaagaag
tctaaaaagaaaattgaagatgaaaataaggttaagtttgaagaagatatcgatttttat
gataaagatatcacatttcaagaaatgaatctttcaagaccagtcatgaaggccttagct
tccatgaagtttgacaaacctatgccaattcaggctgctacaataccagttgcattgttg
ggtagagacatctgtgcatgtgctgttactggatctggtaaaactgctgcttttatgttg
cccatcattgaaagacttttgtacaaaccaaagaattctacatgtactcgagtgctagta
ttacttccaaccagagaacttgctgttcaagttcaccaagttgctaggcagctggctcag
ttcacaaatatagacatgtgtattgctgctggtggtctggacttaaaaatgcaagaagct
gcattacgaaaaggtcctgacgttgtgattgcaacacctggtcgacttattgatcatctt
cacaatgctccacattttagtctccatactgtagaaatcctcgttctagatgaagctgat
aggatgttggacgacttttttgctgaacaaatgaaagaaatcattcgtttatgttctaga
cagcgacagaccatgttattttcagcaactatgactgatgaggttcaagatctggctaaa
gtatctttagataaacccataaaagtttttattaacgaaaacacagatgtagcttttggc
ttgagacaagagtttattagaatacgtcctacaagagaaggtgatagagaagccattgtt
acagcactagtgagtcgtatattttgcaaccattgtataatttttgtgcaaacaaagaaa
caagcacatcgaatgcatattatttttggtttatgtgggatcaacgtcggagaattgcat
ggaaatttatcccaagctcagcgtcttgaagcattaaagagatttaaggaagccagaatc
gatgtgttgttggctacagatttggccgctcgaggcttggatattgaaggtgtgaaaacg
gttattaacttgactatgcccagtaccatcaaacattatgttcacagagttggaagaaca
gcacgtgctggaaagaaagggagagctgttagcttggttggagagaaagaaaggtcttta
ctgaaggagatagtcaagaaagctcatgatcctgtcaaagctcgtgttgttccccaagaa
gttataaacaagtaccgtgatagaattgaacagttagaagatgatatcaaagctgtggaa
aaaattgagaaagaagagaaggaaatccagctgtctgagatgcagttaagccaaataaac
aataaactggaaggaacagacgaacaaaataggaaatggtttcagtcaaaaaaagagaaa
attaaagagaaattgaatggtagactttccaaaatgagtgaagaaccagtttcaaagaaa
agtaaacaattacaaggagtgcgaaagtcaaagaaccaaacacccgtttcaacagagaac
cgcattgaatttgaagtacataaagcacaactttgtgctgcacgattttcaaagaagttt
tcaaaggcaaaacgtataaaagcatgtcctgatacttccaaaaagggaattccagtacat
tacatttatggattggcagaattgtttgaatatccgagaaaatgtcttggggttatttct
tatggctcttaa
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