Octopus bimaculoides (California two-spot octopus): 106868401
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Entry
106868401 CDS
T04127
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106868401
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106868401
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106868401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
106868401
NCBI-ProteinID:
XP_052834040
LinkDB
All DBs
Position
30:complement(3671144..3731809)
Genome browser
AA seq
1393 aa
AA seq
DB search
MDIFKFRSERCEFSAKDAGKRSTIPVAPSIDDLFKLDSVNNEDFNFKISQMSLPSLSQIK
NTRVKKPQFKKSQVKSTNKTTQAKDSQRYQPKMPRDVASKKDEIQFKTVPRRKIFVNPFK
SQETVGGLFHDKTESLLSTQDYNTTTNTNATATTFTDGVTIVIDDNDDDSGRECGGGGGG
GGIGGGGALDIFKDVSLGLSLAPHEDPVFEQEVPTSSVPLPKLNMLKSVMEIPSKFRDIF
PFEYFNSTQSKIVDDALYTDNSIVVCAPTGAGKTVVFELAIVRIIIKAEEMNNYNFKAVY
MAPIKALCTERYEDWEKKLGKLGVQCLELTGDTDVDDFSALQTANVIITTPEKWDSVTRR
WHCDNTLAQHLKLFMIDEIHTLNDPGRGSTIEAVISRMKTIHVASKWMEKDIGEKKNNIR
FMAVSATIQNLNDLAEWLGDSDNPAITYNFNFLLNGVGCHHAGMDYHDRKLMADLFEAGN
LLVLLATSTLAMGVNLPAHLVVIMSTQYYVMGNHQEYSESQILQMIGRAGRPQFDTSATA
VILTKMSNKSKYENLVNGMQVIENLCLQNLNHLASVALIVLDEDTFDIKPTDMGRLMARY
CIAFATMKSFAKLTGSEGLSEQLDILSRSYEFSDIQIRTNEKKTLNSLNKSKTSPTIRFP
FSGKIKTKESKINCLIQATLGCILVPDFSLLQDINKIFRSGQRLTRCLQEILWLKDCHKS
LINAIYINKCFKARIWENSKYVTKQLEGIGQSLSNALVNAGIVNFDKVSEANPRELELIT
NRHPPFGNQLKEGVKGLPKYNIVIKQIQPVTTNPWKRCTEIEINIQIKNKEDIVKNGTTS
QQHTSALIVANADNHILYRRKIMDRNLLEENGFVKKVPVRNSMKGPEIFVNLISFDWVGV
DVSTSFTPINHDYSCQPEKALSLPASSLPSKVRHQPDTRPRQAPSKDNTKCLHRCLNKRE
CSHQCCKVGVKQPQRSGVTRNPRRMQGNGGDGGNGIGQVSAMGQSKNYQEQQKQQQTPIV
KGQSSMYQYMDDLKEKLKGFKQTPIKRLKKFLPSVLSVTTHKLTSVFFNENIHSAANEET
QNDFHYGRDINNTEELCGNFLLELSPLLPECDSGCKQQLVEGGIRFSQNTLDSLPSMTYS
PYPSDNSVSDEELADLHLPVSSQHLLQPSLQLSPQLAHTHQTGPNVGPGLESDSEADPVN
RGLFSSREDNYSQEYPPPSPHYQHQQQQQKRLQQWWNTSEQEEPAVCVQENKSFSCNYQD
QQQQQQKRWDISRRNETAVSIQKDKSSGHNYQQQQQQKQQQQWQWWNTLGQEEQAVHVRM
NKSLGFPHKDPCDAYSSKESQDRMIETECKRGEARYNIKHQWINSWTPDSSNRHRSHPEE
NQKALYSIFDGIF
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggacattttcaagtttagatctgagaggtgtgaattctcagcaaaagatgcagggaag
cgaagcacgattccagttgcaccatccatcgatgacctgttcaagttggattctgtgaac
aacgaagactttaattttaaaatctctcagatgtccttaccatcgttgagccagattaaa
aatacccgagttaagaaacctcaatttaaaaagagccaagttaaatctactaataagact
acccaagctaaagattcccagcgttatcagccgaaaatgcctcgtgatgttgcatcaaag
aaagatgagatacaattcaaaacagtccctcgtcgaaagatatttgttaatccttttaaa
tctcaggagacggttggtggattattccatgacaagactgaaagcctgttgtcaacacaa
gactacaacacaaccaccaacactaatgctactgctactacttttactgatggtgttaca
attgttattgatgataatgatgatgacagtggccgtgaatgtggaggtggtggtggtggt
ggtggtattggtggtggtggtgcacttgatattttcaaagatgtcagtttgggattatca
ttagcaccacatgaagaccccgtgtttgagcaagaagtgccaacatcttctgttcctctt
cccaagttgaatatgctgaaatctgtgatggaaataccatccaaatttagagacatattc
cctttcgaatacttcaattcaacacaatcgaaaattgttgatgacgctttgtatactgat
aattccattgtggtatgtgccccaacaggagcagggaaaacggtggtatttgaacttgcc
attgtgaggatcattatcaaagctgaagaaatgaacaactacaactttaaagcagtttac
atggctcccatcaaagccctttgtacagaacgttacgaagactgggagaaaaagctgggt
aaattgggagttcaatgtctggaacttaccggagatactgatgtcgatgacttctcagcc
ctgcagactgcaaacgtcattattacaacgcctgaaaagtgggacagtgtgacccggcgc
tggcattgtgacaacacccttgctcaacatctgaagctgttcatgattgatgaaatacac
actttaaatgatccaggcagagggtcaactatcgaagcagtgatcagtcggatgaagacc
atccatgtggcctctaagtggatggagaaagacatcggcgagaagaagaacaatatccgg
ttcatggccgtttctgcaaccatacagaaccttaatgatcttgctgaatggttaggggac
agcgataatccagccatcacttataattttaatttcctcctcaatggtgtgggttgtcac
catgctggtatggactaccatgacaggaagttgatggctgacttattcgaagctggtaac
ttactggtacttttggccacctcaactctggcaatgggagtgaaccttcctgctcacctt
gtggtcattatgtcaactcagtattatgtgatggggaaccatcaggaatattcagaatca
cagattttacagatgatcggcagagctggacgaccacagtttgacaccagtgctacagct
gtgatattgaccaagatgagtaataagagcaaatatgaaaatttggtaaatggtatgcaa
gttattgagaatttgtgcctacagaatctgaaccacttagctagtgtggcccttattgtc
ttggatgaagatacctttgacattaaaccaaccgatatgggacgactgatggccagatac
tgcatagcatttgccacaatgaaaagttttgctaaattaactggatcagaaggtttaagt
gaacagttggatattttatctagaagttatgaatttagtgatattcagatccgaactaat
gaaaagaaaacgcttaattctttaaacaaaagcaagactagcccaacaataaggttccct
ttcagtggtaaaatcaaaactaaagaatcgaaaatcaactgtttaatccaggctacactt
ggttgcattctggtccctgacttctccttactccaagacatcaacaagatttttcgttct
ggacagcgcctcactcgctgtcttcaagagatcctgtggctcaaggattgccataaatcc
ctcatcaacgccatctacatcaacaagtgctttaaagcccgcatctgggagaactcaaaa
tatgttaccaagcaactggaaggaataggtcagtctctttcaaatgccttggtaaatgct
ggaatagtcaacttcgacaaagtcagtgaagcaaatcccagagaactggaattgataacc
aaccgccacccaccatttggaaaccaactgaaggaaggagtgaagggtttaccaaaatat
aacatagtcattaaacaaatccagcctgtcaccactaatccatggaagagatgtacagag
attgagatcaatatacagataaagaacaaggaagacatagtgaagaatggtaccacatca
cagcagcacacctcagcacttattgtggccaacgctgataaccacattctctatagacgc
aagataatggacaggaacttactcgaagaaaatgggtttgtgaaaaaggtaccagttaga
aattccatgaaagggcccgagatatttgtcaatttaatcagttttgattgggttggtgtt
gacgtgtctacatcttttacaccaattaatcatgattattcctgccaaccagagaaggca
ctgagcctccctgcttcctccttacccagcaaggtgcgtcaccaacctgacaccagaccc
agacaagcaccaagtaaagacaacacaaaatgcctacacaggtgtctcaacaagagggag
tgtagccatcaatgttgtaaagttggggtgaagcagccacagaggtcaggggtcacaaga
aatccaaggcgaatgcagggcaatggtggtgatggtggtaatggcattggccaggtatca
gcgatgggccaatccaagaactaccaagaacaacagaagcagcagcagacccctattgtg
aagggccagagcagtatgtaccaatatatggatgatctcaaggagaaattgaagggtttt
aaacagacccctattaaaagactcaagaaatttttacccagtgttctttcagtaactacc
cataaactaaccagcgtttttttcaatgaaaatattcattctgctgcaaatgaagaaacg
caaaatgattttcactatggcagggacatcaacaatacagaagaactgtgtgggaacttt
ctcttggaactttctccattacttccagaatgtgattcaggatgtaagcagcaactggtg
gaaggtggcattcgcttctcccagaacactcttgactcacttccttcaatgacctactcg
ccatatcccagtgacaattctgtctctgatgaggagttagctgatctccacctccctgtt
tcctcccagcatctgttgcagccgtccttacagctctctcctcagttagctcacacccat
caaacaggtccaaatgtgggtcccggtttggaatcagattctgaagcagatcctgtcaat
aggggcctgttttcgtccagggaagacaactactcccaagaatatcctccaccttctcct
cattatcaacatcaacaacagcaacaaaaacgtttacagcagtggtggaacacctcagag
caggaagagccagctgtatgtgtacaagaaaacaaatcatttagttgtaactatcaagat
cagcagcagcaacaacaaaagaggtgggacatctcaaggcgaaacgaaacagctgtaagc
atacaaaaggataaatcatctggtcataattatcagcagcagcagcagcaaaaacaacaa
cagcagtggcaatggtggaacactcttgggcaggaggagcaagctgtacatgttagaatg
aataaatcccttggatttcctcataaagatccgtgtgatgcatacagcagcaaggagtcc
caggacagaatgatagaaacagagtgcaagcgaggtgaagctcgatataacatcaagcac
caatggatcaattcttggacaccagattcttcaaacagacatcggtcacatccagaagag
aaccagaaagctctatatagcatttttgatggaatcttttag
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