Octopus bimaculoides (California two-spot octopus): 106868485
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Entry
106868485 CDS
T04127
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106868485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106868485
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106868485
mRNA degradation factors
5'-3' decay
Decapping complex
106868485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
106868485
NCBI-ProteinID:
XP_014769265
LinkDB
All DBs
Position
1:complement(109106112..109161057)
Genome browser
AA seq
1482 aa
AA seq
DB search
MDPVGSNCSESSLANSSVSSVVTSDDTKDGEQTREAVHVGTSIVPSADKSVTTTKPQVQV
VGGSSGQSLVAESKDSVTSSTPTELTSSVDSLSSSVSNTTNVSCSNVVTGNTNMTGTKTQ
SIGDMKSVTQFIEEIKSVNDLINCSTDSTPKTAPSGSVCNHNGGANIGGANHLAQPAAIF
GYRSSNNTQRIILEGNDRANTFSVKSKEVEVITSRLSSNPENQAGSNKVKTTTVVKFEWE
ARKYLGNLVAVHRNGVFVAYCLRGKSGANVRILNRKTADRTLLKDFCGRVTDLAFAFTDK
ILLAAIDEMGNLYIHQITGASEGKIQSKLLLNIVSYNDNQSEFHRVFWCPYIPDESEDDT
SQDNSFSKMLLITHGEKAEIWNVDMVCQKYGTDSVISNEVTCGVLRINSHTKPIADAAFS
PDGSALATASMDGMVKFFQITMNEGPSPSNSCNFRRLHEWSPHGGQPLSCLFFLDDHQNP
HPDVSFWKYAVTGGNYNQELKVWSCVSWTCLQTIRFLDPPSHLETKTELCMKVALDLSAR
YLVLTDFRRKVLYILNLHQDHKAETVYISSISEFLLARPCLSFAILDARSEKFRQSLEDD
TFLEELTTGEIEQDNSKKLFEDEDSTIVDGVLVELYAVHSTILQELNIRFKTEVAQSDSE
VQAVGSKSQDEIVLKDGLSDVSNIMDTSVPDSSESSRGEKAPVLLTPDAFTSKPYSLQTI
SANSSFTQVSAMEDSTECHPLATGVGRNGNSDAVATAAVSVTACNNTVSHTSSPNSSLVS
SQSPLKNKDTNMPSVSTISPVVSIDSSHSPVVTNLPLQNIFSEPTKISVEELFKMSQQVS
VSSQAAVVVSGSITSSVSLEGEQAFRKTRRKDFDETDKEVAEVMGDKHVADEVDEVSPLE
IETSNIATESNVTAKISPREWPKPPDVSTDGPRIASEKVCNVREGQDIDDDEEEDEDYSL
LVDASSNSKAKQPKPLARQMQLTSEPAAPPIHEAPVQIIREVVEPQSLKDIQAMLSTINN
KLTRFELLSQQMQELFIQQQQQLKQQAALQQMAKVAVTLPVLEQHLKSMENRMTGHFERL
MHQQSQREHQRYQEILNETQSYDKKHEALVNTLWQAVDTTLRKNLEMMVKSEMKNNVLPT
MMQSLESIKMDLTREVAQKLSASDAILKENLAKLVRNRQTIEAIGSSVGAAIEVPIQTAY
RESFQNIVIPNFERTSQNMYNQVHDTFQKGTKEYLVQLQQHLEVGRRRQMEVWDPVVSQL
QSTVEMFKGSTEHLHTHLLSVLEKKLETVVTQSLKGLKDTLLQHVREVVKDEVNKAMRLQ
GNTISDNVLSAMRSGAVTPVPGTQDVHILQNQILRLLNQGQINAAFQQALSAANLELVIL
TCEKANPDQVFGQIPFPLQQPVLLSLIQQLSADIETHTLLKQKYLEEAIVSLDTTNPITH
EHKRSVLSGLIPKLNNFIQSHPNSPDRRSISKLLMLAQAHFN
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgtcgggagtaactgcagtgagtccagtttggctaactctagtgtatcatcc
gttgttacctcggatgataccaaggatggtgagcaaacacgtgaagctgttcacgttggt
acatcaatagttccatcagcggacaaaagtgttactacaacgaaacctcaagttcaggtg
gttggtggtagttccggtcaaagcctagtggcagaaagtaaagattctgtaaccagctcg
actccaacagaactaactagcagtgttgattccttaagtagcagtgtgtctaacactact
aatgttagttgtagtaatgtcgttacaggtaacactaacatgaccggtaccaaaactcaa
agtatcggcgacatgaaatccgtaactcaatttatagaagaaataaaatcagtgaatgac
ttgataaattgctctactgattccactccaaagactgcaccttcaggatctgtttgcaat
cataatggtggagcaaatattggaggagctaaccatttagcacaacctgctgccattttt
ggttaccgaagttctaataacactcagagaataattcttgagggaaatgatcgtgctaat
accttcagtgtcaagagtaaagaagtggaggttattactagcagattgagtagcaatcca
gaaaaccaagctgggagcaacaaggtgaaaacaacaacagttgtgaaatttgagtgggaa
gctcggaaatatttaggcaaccttgttgctgttcacagaaatggtgtgtttgttgcttat
tgccttcgaggtaaatctggtgctaatgtacgcatacttaatcggaaaactgctgacagg
acattattaaaagatttctgtggacgtgtgactgacttggcttttgctttcactgataag
atattgcttgcagctattgatgaaatgggaaacctttatatacatcaaattactggagcc
tcagagggcaaaattcaatcaaaattattgctgaacattgtctcttacaatgataatcag
tctgaatttcacagagtcttctggtgtccatacattcctgatgaatctgaagatgatact
tctcaggataattctttttctaagatgcttcttatcactcatggagaaaaggctgaaata
tggaatgtagacatggtatgccaaaaatatggcacagatagtgtaatatctaacgaagta
acttgtggtgtgctgcgaatcaacagtcatacaaagcctattgcagatgcagcattttca
cctgatggatcagcacttgctacagccagtatggatggcatggttaaatttttccagatc
accatgaatgaaggtccatctcccagtaattcctgtaatttcagaagactccatgagtgg
tcacctcatggaggacagcccctttcttgtcttttcttccttgatgatcaccagaaccct
catcctgatgtctctttttggaagtatgctgttacaggaggtaattacaatcaggaattg
aaagtatggagttgtgtctcctggacctgtttacaaacaattaggttcttagatccgcca
tcacatcttgagaccaaaactgagctttgcatgaaagttgcattagatttaagtgcacga
tatttagttttaacagatttccgacgcaaagttctgtacattttgaacttgcaccaagac
cacaaagctgaaacagtttatatatcatcaatttctgaattcctacttgcccgaccatgt
cttagttttgctatacttgatgcccgttctgaaaaattccgccagtctcttgaagatgac
acatttctcgaagaattgactactggagaaattgagcaggataattctaagaaacttttt
gaggatgaagatagtacaatagttgatggtgttcttgttgagctgtatgctgttcatagc
acaatattgcaagagcttaatattcgattcaaaactgaagttgctcaatctgacagtgaa
gttcaggctgttggttctaaatcacaagatgagatagttttaaaagatggactttctgat
gtcagtaatattatggatacatccgtccctgattccagtgagtcttctcgtggagaaaaa
gctcctgtacttctcacacctgatgcctttactagtaaaccctactctctccaaactatt
tctgcaaatagcagttttactcaagtttctgcgatggaggacagtacagaatgtcaccct
cttgcaacaggtgtgggaagaaatggcaatagtgatgctgttgctactgctgctgttagt
gtcacagcttgtaataataccgtgtcacatacctccagcccgaatagcagtctagtctca
tctcaatcaccacttaagaataaagatacaaacatgccttcggtgtccaccatttcacct
gtggtttccattgattcttcccattcaccagttgtaactaatctaccattacagaacata
ttttcagaaccaacaaagatcagtgttgaagagctattcaagatgagccagcaagtttcg
gtgagcagtcaagcagctgtagtagtaagtggttcaattaccagctcagttagcttagaa
ggagaacaagcatttagaaaaacaaggcggaaagattttgatgagactgataaagaagtt
gctgaagtaatgggcgataaacatgttgcagatgaagtagatgaagtatctccactggaa
attgagacaagcaatattgctacagagtctaatgttacagcaaagatatctccaagggaa
tggcccaaaccaccagatgtcagcactgatgggcctagaattgcatctgaaaaagtgtgc
aatgtgagggaaggacaagacatcgatgatgatgaagaggaggatgaagactattcactt
cttgttgatgcatcgtcaaattcaaaagcaaaacaaccaaagccattagccaggcaaatg
caattaactagtgagccagctgccccaccaattcatgaagcccctgttcagataatccga
gaagttgttgagccacaatctttgaaggatattcaagcaatgctttctactattaacaat
aagttaacaagatttgagttgctttctcagcaaatgcaagagttgtttatacaacagcaa
caacagttgaagcagcaagcagctttacaacagatggcaaaggttgctgttactttgcca
gtccttgagcagcacttaaaaagcatggagaatcgaatgactggacattttgagcgctta
atgcaccaacagtcacaaagggaacaccaaagataccaggagattttgaatgaaactcag
tcgtatgataaaaagcatgaagcactagttaatactctttggcaagctgtggacacaact
ctaaggaaaaaccttgaaatgatggttaaaagtgagatgaaaaataacgttcttccaacc
atgatgcagtctttggaatctatcaagatggatttgacaagagaggtggcccagaaatta
tctgcttctgatgctattcttaaagaaaatcttgccaagcttgttcggaatagacaaact
attgaagctattgggtcatctgttggggcagcaattgaagtgcccattcaaacagcatat
cgagaatcattccagaatattgtcatccctaattttgaaagaacctcccaaaacatgtat
aaccaagtacacgacacattccaaaaaggaaccaaagaatacttggttcaacttcagcaa
cacttagaagttggtcgtcgaagacagatggaggtttgggatcctgtagtttctcagttg
caatcaactgttgagatgttcaaaggttcaactgaacacctacacactcatttattatca
gttttggagaaaaaactagaaactgttgttacacagtcattgaaaggactgaaagacact
ttacttcaacatgtacgagaagttgtgaaggatgaagtgaacaaagccatgcgactccaa
ggaaacaccattagtgacaatgtattaagcgcaatgcgttcgggagctgtgaccccagtg
cctggtactcaagatgtccacatattacagaatcagatactgcgacttttaaaccaggga
cagattaatgctgcttttcaacaggccttgtctgctgctaacctagaattggtaatactt
acttgtgagaaagctaatccagatcaagtctttggacaaattcccttcccattgcaacaa
cctgttcttctatctttgattcagcaactatcagctgatattgaaacacacactctattg
aaacaaaagtatttagaagaggcaattgtcagcttagatacaaccaacccaatcactcat
gaacacaaaagaagtgtgctcagtggccttatccctaaattgaacaatttcatccaatca
catccaaattctcctgatcgccgatcaatcagtaaactcctcatgcttgctcaggcacat
tttaactaa
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