Octopus bimaculoides (California two-spot octopus): 106868567
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Entry
106868567 CDS
T04127
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106868567
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106868567
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
90S particles
Helicases
106868567
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
106868567
NCBI-ProteinID:
XP_014769374
UniProt:
A0A0L8HU35
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Position
1:85577141..85597979
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AA seq
591 aa
AA seq
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MDGHSLFRLLGVGAKFDLKRFKSDAQKLKLIKTDVKEIKPETDSTLLEETSTTNTELSKK
KRSRKVEELDEDDEGDIIFYKQKKVQKTEPDKGNSVKKVTKNKDSLETLIRKKNKIHVHG
FDPPPPVTDFEQLKNYSIHPRLLENVKKVEYTKPTPIQMQAIPVMMRRREVMACAPTGSG
KTAAFALPVLNYLKEPRNSGIRSVILAPTRELSNQIYQEMQRLSEGLGLRIYYIKKANLK
KIGPKTFSKKDILVTTPQRLVFVLSQEPQILSLSSVEWLIIDESDKLFEDGKTGFRDQLG
VIYKACDSPNIRRAMFSATFAHDVEQWCKKSLNDVIQVYIGGKNTATETVEQQLMFVGSE
SGKLFALRDIVQKGIEPPVLIFVQSQERATELFQELIYDGINVDVIHAGRSQAQRENVVS
SFREGKIWVLICTELMGRGIDFKGVNLVVNYDFPTSAISYIHRIGRTGRAGRQGKAITFF
VEDDVDYLRSIANVMHGAGCPVPEYMLKLKRPSKKDRRKMAQKNPKRKGISTSLRENKKK
LKRNKNNSDLPNGISKTKLKASREFPGKKKKKVSKEFPGKRKKASKKSSNK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggatggccattctttattccgactcctcggagttggtgcgaaatttgacttaaagcgc
tttaagtctgatgctcagaagcttaagttaattaagacagatgtaaaagaaatcaaacct
gaaactgattctaccttattagaagaaacctctaccaccaatacagaattgtcaaagaaa
aaaagatctagaaaagttgaagagctagatgaggatgatgaaggtgacattattttttat
aaacagaagaaagtacaaaaaacagaacctgataaaggaaattctgtgaagaaagtaact
aaaaataaagactcattggaaactctgattcgcaagaaaaataaaatccatgtgcatggt
tttgatcccccaccaccagtaacagattttgagcaactgaaaaactacagcatccatcca
agactcttggagaatgtgaagaaagttgaatacaccaaacctactcccattcaaatgcaa
gcaataccagtgatgatgcgtagacgagaggttatggcatgtgccccaactggttctggt
aaaacagcagcatttgcattgcctgttttgaactatcttaaagaaccaagaaatagtggt
ataagatctgtgatactagcccctactcgagaactgtccaatcagatataccaagaaatg
cagcgcctatctgagggacttggactgcgaatttattacattaaaaaagctaacctaaag
aaaattggaccaaagacattcagcaagaaagatattttggtgacaacccctcaaagactt
gtttttgtcctttctcaagaaccacaaatcctctctctaagcagtgttgaatggcttatc
atagatgaatctgacaaattgtttgaagatggtaaaacaggattccgcgaccagcttggt
gttatctacaaagcatgtgactctccaaatatccgtagagccatgtttagtgctactttt
gcccatgatgttgaacagtggtgtaagaagagtctaaatgatgtgatacaggtctacatt
ggtggcaagaacactgctacggaaacagttgagcaacaactgatgtttgttgggtctgaa
agtggcaagctctttgctttgagagatatagttcaaaagggtattgaacctccagtttta
atatttgtgcaatcccaggaacgtgcaacagagttatttcaagaattgatttatgatggc
ataaatgttgatgttatacatgctggtcgttcacaggctcagagagaaaatgttgtatca
agtttccgtgaaggcaaaatatgggtccttatttgtactgagctcatgggacgaggtatc
gatttcaaaggtgtaaacctggtagtcaattatgattttccaaccagtgccatcagttat
attcacagaatcggtcgtactggacgtgctggaagacaaggcaaggctattacattcttt
gttgaagacgatgttgattatttacgaagtattgccaatgttatgcatggtgctggttgt
cctgttccagaatatatgttgaaactaaaacgtcctagcaagaaagaccgcagaaaaatg
gctcagaaaaatcccaaacgaaaaggcatttctacttcccttagagaaaataaaaagaaa
ctaaaaaggaacaaaaataattctgatttaccaaatggaatttcaaaaacaaagttgaaa
gcttcaagagagttccctgggaaaaagaagaaaaaagtttcaaaggagtttcctggaaaa
agaaagaaagcttcaaagaaatcatctaataaataa
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