Octopus bimaculoides (California two-spot octopus): 106868974
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Entry
106868974 CDS
T04127
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
obi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106868974
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106868974
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obi01009
]
106868974
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106868974
03036 Chromosome and associated proteins [BR:
obi03036
]
106868974
Protein phosphatases and associated proteins [BR:
obi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106868974
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106868974
SWI/SNF complex
106868974
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106868974
PBAF complex
106868974
SWI/SNF complex
106868974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
106868974
NCBI-ProteinID:
XP_014769942
UniProt:
A0A0L8HT92
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All DBs
Position
16:53224447..53243264
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AA seq
379 aa
AA seq
DB search
MAAHTATKTFGEKPKSFQLDDGGEYYYIGSEVGNYLRLFRGSLYKKYPSMWRRLVTVEER
KKIAAMGFGQHTLATNITLLKAPEVDEIFEGNDDKYKAVSLSSDPFPTRENKSKRNNWVP
ALPSSSHHLDAVPCSTPINRNRLGKNKMRTFPLCFDDTDPSQIHENASTAEVLIPIRLDM
EFDGQKLRDCFTWNKNEALISPEQFAEILCDDLDLNPLNFVPAIAQAIRQQIEAYPLDNL
LEEQADQRVILKLNIHVGNISLVDQFEWDMSEVDNSPEEFAIKLCAELGLGGEFVTAIAY
SIRGQLSWHQRTYAFSRQSVSFSEAPLPTVEVAIRNQNEADQWCPFLETLTDAEMEKKIR
DQDRNTRRMRRLANTAPSW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcacacagcaacaaagactttcggtgagaaacccaaatcattccaacttgac
gatggaggagaatattattatattggctcagaggttgggaactatcttcgactgtttcga
ggttcactttacaagaaatatccttccatgtggcgccggctggttactgtggaagaaagg
aaaaagatagcagcaatgggttttgggcaacatactcttgcaactaacatcactttgttg
aaagctccagaagtagatgaaatttttgaaggaaatgatgacaagtataaagcagtatct
ctttccagtgatccctttcccacgagagaaaacaaatccaagcgaaacaattgggtacct
gctcttcctagtagttcacatcatttagatgctgtaccatgttccacacctatcaatcgc
aatcggcttggaaagaataaaatgagaacatttccattatgttttgatgacacagatccc
tcacaaatacatgaaaatgcttcaactgctgaagtgttaattccaatccgtttagacatg
gagttcgatggtcaaaagttacgagattgtttcacttggaataaaaatgaagcccttata
tcacctgaacagtttgcagaaatattgtgtgatgatttggatcttaacccactcaacttt
gttccagctattgctcaggcaattcggcaacaaattgaagcttatccattagataatctt
cttgaagaacaggcagatcaacgagttattttaaagttaaacatacatgtcggtaacatc
tccttagtggaccagtttgaatgggacatgtcagaggttgataatagccctgaagaattt
gctataaaactttgtgcagagttgggtcttggtggtgaatttgtgacagctattgcatat
agcattcgaggacaactgagttggcatcaaagaacatatgcatttagccgtcagtctgtg
tctttcagtgaggcacctctgcccacagtggaagtcgctattcgcaaccaaaatgaagct
gatcaatggtgtccattcctggagacgctcactgatgcagaaatggagaagaaaataagg
gatcaggatcgtaataccaggagaatgcgacgacttgcaaacactgcaccatcctggtga
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