Octopus bimaculoides (California two-spot octopus): 106869128
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Entry
106869128 CDS
T04127
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106869128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106869128
Enzymes [BR:
obi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106869128
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
HECT type E3
106869128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
DCD
Motif
Other DBs
NCBI-GeneID:
106869128
NCBI-ProteinID:
XP_014770177
UniProt:
A0A0L8HQY3
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All DBs
Position
5:complement(40654212..40754111)
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AA seq
1061 aa
AA seq
DB search
MSNVVFCWGNSQDGQLGIGADDVHIVTSPKQLYSDDINNLIVSIACGQHHTLIALENGET
YSCGNNDYSQLGHNKSRTRLVHVAALKNLYVKRVAIGVYHSLVLHTGGEVYSWGDNSRGQ
LGRAAIADDEWWRIPKLVKELALHTVIQITCGAYHCIALTDIGDVWCWGANNHGQLGVGM
NSEQCDRPRHLICLRGIPVAQIAAGNYHSFIMSKSGAIFGWGRNSFGQLGLNDEIDRNSP
TFCKPLKYQRLKYISCGENHTAALTQEGGVYTFGAGGYGQLGHGTTHSEIMPKMVMELMG
TTITQIACGRNHTLAYASTSSKLYAFGLGGSGQLGLGTTNNRSNPFPIATPFFATKLPER
METDCDENPDLQTLAELSVKRVYSGGDHCLVVCSPVQENVAAEDFRESICEQQPLTCTQA
LFEEMYSISEDEQPSQDLLERIEKVFSSASCLNGSFLHNDHVHCNIKNSGVDMKHVRQQV
SELAQLDNKQLVNRILDHLVNNLISQLPKSPPHMEALRLYLILPEMSFMDQPHRHGTLIT
PFGLKLIQLDRAALRVLESWWAMLESKYFSRIVYVYKQCLSYIFSSPLATRESDQQIKKR
TVLVSMEVLKKLNSVNESNGQIIPYHQFYVPEVKEAVNIRQDYIAWIQKTSNMEMSESET
LLFCDYAFLFDAATKYVLLKTDNYLQMRYAIGEVAFLNTTTFSNAFGQINPCLMLLVQRD
NIMQNTLDQLNKRSPADLKKPLKVIFAGEEAVDEGGVTKEFFLLIMREILNPDYGMFKYY
EESRLMWFNSETFETTDKFHLIGTICGLAIYNFTIIVLPFPLALFKKLLNKPVTLDDLKE
LMPSIGRSLEQILAYGEDDFEEVFGITFEISVESFEKVKNVELVPGGAKKVVNKSNRKEF
VDAYVDYIFNKSVEKEFLAFSEGFSKVCRSKALELLHPRELQAMVIGNEQYDFIELEKNT
TYKDEYHRYHTTIKFFWEVFLDLSLEDKKKFLLFLTGSDRIPITGMTSLKMIIQPTKSGE
DYLPVAHTCFNLLDLPRYTSKAKLHSKLLQAINQTEGFGLV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgtagtgttctgttggggtaactctcaagatggacaattgggcattggagct
gatgatgtccacattgtaacaagtcctaaacaactgtactctgatgacataaacaatctt
attgtgagcattgcttgtggtcaacaccacactttaattgccctagaaaatggtgaaacc
tactcctgtggtaacaatgactacagtcagttgggacacaacaaatctagaaccagacta
gtacatgtggccgcattgaagaacctgtatgtgaagcgagtggcaattggtgtctatcac
agtttggtgctgcacacaggtggtgaggtatacagctggggagataacagcagaggacag
ttgggaagagctgctatagcagatgatgaatggtggcgaataccaaaattagtgaaagaa
ctagccttgcacactgtgatacaaataacctgtggagcttaccactgtatagccctcact
gacattggagatgtttggtgttggggagccaataatcacggacaactaggcgtgggaatg
aactctgaacaatgtgatagaccgcggcatttaatatgtctacgtggaatacctgtggct
caaattgctgcaggcaattaccatagttttattatgtcaaaatcaggagcaatctttggg
tggggaagaaacagttttggacagttgggtttgaatgatgaaattgatcgtaactcacct
acattttgtaaacctctcaagtaccagagacttaagtacatatcatgtggagaaaaccat
actgctgctctcactcaggaaggtggtgtctacacatttggtgctggtggctatggtcag
ttaggccatggcaccacacacagtgaaatcatgccaaaaatggtaatggaactaatgggt
acaacaattacacagatagcatgtggcaggaatcatacattagcctatgcatcaacgagt
agtaaactgtatgcttttggacttggtggaagtggtcagttggggttaggcactacaaac
aaccgcagcaatccatttcctatagcaaccccattctttgcaaccaagctaccagaacga
atggaaacagattgtgatgaaaatccagatttacaaacattggctgagttgtctgtaaaa
agggtttattctggtggtgaccattgtcttgtagtgtgttcccctgtacaggaaaatgta
gcagctgaagatttccgggaatccatttgtgaacagcaacctctcacctgtactcaggct
ctctttgaagaaatgtatagtatttcagaagatgagcagccatctcaggatttattagaa
agaatagaaaaagtattctcctctgcttcttgtttaaatggatcattcttacataacgac
catgtccattgtaacatcaagaatagtggtgttgacatgaaacatgtcaggcagcaagtc
agtgagttggcacagcttgacaacaaacaattagtaaatcgtatattagaccatttagtg
aataacctgatctcccagttgccaaagtctccccctcacatggaagctctccggttgtac
ttgattctacctgagatgtcttttatggatcagccacatcgtcatggcactttgatcaca
ccttttggtttgaagctgattcagcttgatagggctgcgctacgagtcctcgaatcatgg
tgggccatgctggagtcaaagtatttcagcagaattgtttatgtttacaaacagtgtctt
agttatatattttcatccccattagctactagggaatctgatcaacaaatcaagaagaga
acggtgcttgtctcaatggaagttctcaagaagctcaattcggtgaatgaaagtaatggc
cagatcatcccataccaccaattctatgtgcctgaagtgaaggaggctgtaaacatcagg
caggactatatagcatggattcagaagactagtaacatggaaatgtcggagagcgaaact
ttgctattttgtgattacgccttcctgtttgacgcagcaacaaagtatgtgcttcttaag
acagataactaccttcaaatgcggtatgccattggagaagtggctttcctgaacactaca
accttttccaatgcatttggccaaatcaacccttgtcttatgcttcttgttcaacgagac
aacatcatgcaaaacacccttgaccagctcaacaagcgcagtcctgctgacctcaagaaa
ccattaaaagtgatatttgctggagaagaagctgttgatgaaggtggtgtaacaaaggag
tttttcttacttatcatgcgtgaaattctaaaccctgactatggtatgttcaaatactat
gaggaatccaggttaatgtggtttaatagtgaaacttttgaaactactgacaaatttcat
ttgattggaacaatatgtggcttggccatctataactttaccataattgtcttgccattc
cctctagcattgtttaagaaattgctgaacaagcctgttactctcgatgatctcaaagag
ttgatgccgtccattgggaggagtttagaacaaattctggcatatggagaagacgatttt
gaggaagtctttggcattacatttgagatatcagtggaaagttttgagaaagtgaaaaat
gttgaattggttcctggcggcgcaaagaaagttgtaaataaatcaaatagaaaagaattt
gttgacgcttacgtggactacatcttcaataaatctgttgagaaagaattcctggctttc
agtgaaggcttttctaaagtgtgcaggagcaaagctttggaattactgcatccccgtgaa
ttacaagcaatggttattggcaatgaacaatatgattttatagaacttgaaaagaatacc
acttacaaagatgaataccaccgttatcacactactatcaaattcttctgggaagtattt
ttggacttgtcactggaagacaaaaagaaattcctgttgtttctaactgggagtgacaga
attcctattactggaatgacctctctcaagatgattattcaaccaaccaaaagtggagaa
gattatttacctgttgctcacacatgcttcaacctactcgacctgcctagatacacctca
aaagcgaaacttcattccaaactgttgcaagccattaaccagacagagggctttggactt
gtgtaa
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