Octopus bimaculoides (California two-spot octopus): 106869145
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Entry
106869145 CDS
T04127
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106869145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106869145
03036 Chromosome and associated proteins [BR:
obi03036
]
106869145
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106869145
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106869145
PBAF complex
106869145
GBAF(ncBAF) complex
106869145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SR-25
DAAD
Motif
Other DBs
NCBI-GeneID:
106869145
NCBI-ProteinID:
XP_014770206
EnsemblRapid:
LOC106869145
LinkDB
All DBs
Position
9:complement(2723679..2798525)
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AA seq
652 aa
AA seq
DB search
MQHHQMTMQPQPPPPPPPPLQQQQQQQQQRYAPQGPPPMRSFSPSGYPQERFRQPNFHKN
SMEKDGGVINHPKLAVLQIEKGPRAPYPGPQMGSGGPPPPPMGMRAGGPGVPPHGYPASS
PTYMTLVMRKRGKASSSTCSSSSSSSSSSSSSSTSHKTSTNSKTRESGTSKRELKKRERS
REKTKRVRKEKLKKSVQSRQSHSNVNGMPRTGISPGMPPPGMQGPLDRKRAANEARAPQQ
ISKPKKKKKIADKILPQKVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQEALKRPMKQ
KRKLRIFISNTFTPGKPEGEDGEESVSSWELRVEGRLLDDAASSKLSDANKVKRKFSSFF
KSLVIELDKDLYGPDNHLVEWHRTPNTQETDGFQVKRPGDNNVKCTVLLMLDYQPMQFKL
DQRLARLLGMHTQTRPVIINALWQYIKTHKLQDPHEREYINCDRYLEQIFECKRMKFAEI
PSKLHPLLMAPDPIVINHIIVGPSVYNRDRKSVDRMDGPDAKKTACYDIDVEVDDTLKQQ
MNSFLLSTQSQQEIATLDNKIHETVETINQLKINREFFLSFAKDPLEFINNWLISQTRDL
KTMTDIVGNPEEERRADYYYQPWVQEAVCRYFYGKVQQRRLELEQALGIRNA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcatcagatgactatgcaaccacagccgccaccgccgccgccgccgccgcta
cagcagcagcagcagcagcagcagcagcgctatgcccctcagggcccgccaccaatgcgg
tcattttcgccatcaggatatccacaggagcggttccgccagcccaatttccacaagaac
tcaatggaaaaggatggtggcgttatcaatcatccaaagttggccgtattgcagattgag
aagggacctcgagccccataccctggaccacagatgggcagtggtgggcctccaccacca
ccaatggggatgagagccggtggacctggtgttcctccacatggttatccagcttcaagt
cccacctatatgacattggtgatgcgaaaaaggggaaaagcctctagtagtacttgctcc
tcttcctcctcctcttcttcctcttcttcctcctcctctacatctcacaagacttcaacc
aatagcaagacccgagagtctggaacctcaaaaagagagctaaagaagagagaaaggagt
agagagaaaacaaagagggtcaggaaagagaagttgaagaaaagtgtccaatcccgacag
tctcactccaatgtgaatggtatgcctcgaacaggaatctcacctggaatgccgcctcct
ggcatgcaggggcccctggatcggaagcgggcagcgaacgaagcaagagcacctcagcaa
atctctaaacctaaaaagaaaaagaagatagcagataaaattctacctcagaaagttcgt
gatttggtccctgaatctcaagcgtacatggacttgttagcattcgaacggaaattagat
gccactattatgagaaagaggcttgatattcaagaagctctgaagagaccaatgaagcaa
aaacgaaagctacggatatttatctccaatacttttactcctgggaaaccagaaggtgag
gatggtgaggagtcagtgtcatcatgggaattacgtgtagaaggacgccttttagatgat
gctgcaagttccaagcttagcgatgctaacaaagtgaaacgaaaattctcgtcttttttc
aaaagtcttgtaattgaacttgacaaagatctgtatggacctgacaaccatctagttgag
tggcatcgtacgcccaacactcaagagacggatggatttcaagtgaagaggccaggtgat
aacaacgttaagtgtactgttcttctaatgcttgattatcagccaatgcaattcaaactt
gatcaaagactggctcgtctccttggaatgcacacccagactcgccctgtcatcatcaat
gctctctggcagtacatcaagacacacaagttacaagacccacatgaaagagagtacatt
aactgtgaccggtatctcgagcagatatttgaatgcaagagaatgaagtttgctgagatt
ccttccaaactacaccctcttcttatggcaccggaccctattgtgataaaccacattatt
gtcggaccctcagtgtataaccgtgaccggaaaagtgttgacaggatggatggacctgat
gccaaaaaaactgcttgttatgatatagacgtggaagtggatgacacattaaaacaacag
atgaattctttcttgttatctacgcaaagtcaacaagaaattgctacactggataataag
attcatgaaacagttgaaaccataaaccaactgaagataaatagagaattcttcctcagt
tttgctaaagatccattagagtttatcaacaattggttaatatctcaaaccagagatcta
aagactatgacagatattgttggcaacccggaagaagagagacgagctgattattactat
cagccttgggtacaggaagcagtatgtcgctacttctatggaaaggtccaacaaaggaga
ctagaacttgaacaggcacttggtatcaggaacgcataa
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