Octopus bimaculoides (California two-spot octopus): 106869170
Help
Entry
106869170 CDS
T04127
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106869170
03036 Chromosome and associated proteins [BR:
obi03036
]
106869170
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106869170
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
Pre-60S particles
Helicases
106869170
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106869170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
GRP
DUF4800
Motif
Other DBs
NCBI-GeneID:
106869170
NCBI-ProteinID:
XP_014770272
LinkDB
All DBs
Position
5:33856213..33900375
Genome browser
AA seq
641 aa
AA seq
DB search
MTAKVNEDSKKKIKKKENKTNMNGNASSASDNDKVDPQVEIGAFSNFRISDTSIQKLKAN
SIDYLFPIQSQTFDYVYDGHDVIAQARTGTGKTLSFVLPLVEKLIKKKKTKEGRMPRVLV
LLPTRELAKQVYEDFLKVCGELSAFCFYGGVPYEPQERALWKGLDILVGTPGRILDHIQK
GNMSLQKAKHVVLDEVDQMLDMGFAESVDEILKVAYDKEDEGHKPQTLLFSATLPPWVYR
TAQKYMKKDVKKVDLIGQQQIKTSTTVQHLAIKCSIQDRNSIIADIIQVYSGNHGRAIVF
CQTKKQADELAVSASMKLDAHVLHGDIPQDKRELVLKSFRDSKYKVLLTTDVAARGLDIP
EVDLVVQCSPPKDTDAYIHRSGRTGRAGRSGISVLFYSPRQESDLMQVERRAGVSFKRIG
PPTTVDIIKTYAKDAARSLDNVPDETLDYFRDSANILIEERGAENALAAALAVISKSTKI
ISRSLLSAKEGYVSFVLRTNTEIRSPGYLLNALERQVPEMSYKVGEIRLTKDKKGGVLDV
PADMVRLLEMKWLNSKHESLEKATELPELIEDNSAMRNGRRGYGGGGGGGGGGYGGGWGR
DRNSRGGGGGGGGFNRGRRPDWRNSRFDNHGGPPKKRFRFD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaaggttaatgaagattcaaaaaagaaaataaagaaaaaagaaaacaaaacc
aatatgaatggaaatgcttctagtgcatctgataatgacaaagttgatccccaggtggaa
attggtgcttttagtaatttccgtatttctgacacctctattcaaaaattgaaagccaat
agtattgattatctttttccaattcaatcacaaacttttgattatgtctatgatggccac
gatgttattgctcaagcacgaaccggcactggaaaaacactttcttttgttttgccactg
gtagaaaaactgattaaaaaaaagaaaacaaaagaaggtcgaatgcctagggtattagtc
ttactcccaactcgtgagttagctaaacaggtatatgaagattttctaaaagtctgtgga
gagctttctgccttttgcttttatggtggagtaccatatgaaccacaagagcgtgcattg
tggaagggcttggacattttagttggcacaccaggccgtattcttgatcacatccagaaa
ggcaatatgtctttgcagaaagctaaacatgtagttttggatgaagttgaccagatgttg
gacatgggctttgctgaatctgttgatgaaattttaaaggttgcttatgacaaagaggat
gaaggacataagccacagacgttacttttttctgcaactctgccgccctgggtgtataga
actgcccaaaaatacatgaaaaaagatgttaagaaggttgacttgattggccagcaacaa
ataaagacttctacaactgtacagcaccttgctatcaaatgtagcattcaagaccgtaac
agtattattgctgatataatccaagtgtacagtggtaatcatggtcgtgccattgtgttc
tgtcaaacaaaaaagcaagctgatgagcttgctgttagtgcttcaatgaagttagatgct
catgtgttgcatggtgacattccccaagataagagagaacttgtccttaagagcttccgc
gatagtaagtacaaagttcttctaacaactgatgttgctgcaagaggcttagatatacca
gaggttgatttagttgtgcagtgtagtccaccaaaagatacagatgcctatatacatcgc
tctggaagaacaggacgtgctggccgttcagggataagtgttttattttattcaccgcgc
caagaaagtgaccttatgcaagttgaacgaagagctggtgtcagttttaagcgaattggt
ccaccaaccacagtagatatcatcaaaacatatgctaaagatgctgcaagatctttagat
aacgttcctgatgaaactttagattactttagagactctgccaatattcttattgaggaa
cgaggagctgagaatgctcttgccgcagcacttgcggttatttctaaaagcacaaaaatt
atttctcgatcacttttaagtgctaaagagggatatgtatcttttgttttgcgaacaaat
acagaaattcgttccccaggctatctgttaaatgctttggagcgacaggtaccagaaatg
tcctataaagttggagaaattcgtttaacaaaagacaaaaaaggtggtgtcctagatgtc
ccagcagatatggtgcggcttttggaaatgaaatggttaaattcaaaacatgaatcttta
gaaaaagcaactgaactgccagaactaatagaagacaacagcgcaatgaggaatggcaga
cgaggctatggaggtggtggtggtggtggtggcggtggttatggaggtggctggggacgt
gacaggaactctagaggtggtggtggtggtggtggtgggtttaacagaggccgcagacca
gactggagaaatagtagatttgataatcatggaggtccacccaagaaacgcttcagattt
gactaa
DBGET
integrated database retrieval system
