Octopus bimaculoides (California two-spot octopus): 106869329
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Entry
106869329 CDS
T04127
Name
(RefSeq) spatacsin isoform X1
KO
K19026
spatacsin
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106869329
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106869329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
106869329
NCBI-ProteinID:
XP_014770524
UniProt:
A0A0L8HR91
LinkDB
All DBs
Position
17:complement(8237..119066)
Genome browser
AA seq
2496 aa
AA seq
DB search
MADDGESDSDFLEYKLCSFQDELSLDGIKNILLCPRYHILVILYNDANLHVFRASDTRQQ
LKTVPNISSIHYDSNEHHETTLCMHHIDGKLSAFSLEDDLRYLFTCEESVLALVLCKEGL
ELFKSTAPYLLGYAHSSVILLTKKRPTNCQASSDAIATTTTLTIACVYFTSEASQKPCCQ
YTIVLSDQFEEDHIVPSVQLYESTISVLNWPQHTLYLYDSSDGVCYLQVDLCSVVHLCSS
MPRFWCMSNDVAHLFLITEINSAICLSLKDLYTLCPADCKFFFPSNNLSQDREYKKWIRI
HKYGYCLPVIQRGQFSNVSCLGKVVKRRVSGLKKCLSSATLDEKIKVVQLPEFLEQHSVK
EIALSTTSAKVLFSKRDNIDLSILWLCDFTTGNVKLKRFKKETGLLVLGMEKCHPPLILK
ETGIFAIVDELHQEEFVDKVMTYGGARFTDELCQMNHWGRCSLPLRALELGLKYRQIDTV
TIFLQTRQNLFSHEKKTDGNEQKNGNVNSCLPKLQALEPAYRLLLQSIEDNMAEQQSLFF
AQQLLGIMLNHLYSVLNDILAFKNSLLDNIALEVLQETESMTQTVLQYIAKVRTYMNAFG
LKKQNSLTDDAKIGICTSIESSTAEYNEWSEMDVTDAIEDSIRKNTVPIVQYYLLQQNSP
ELASLSEVTRLGLLQGIKYLMNAKFDEASLLLSNLGYKPVEKYWEFALYTNDCLLRDCIL
NYFTETTEEQQKLITFFHLLQQTYPCISYEKAKENILPLNGWKVVDAIAACMSIAPSCVN
IKASCGEVSINKPEESVSPVTSPYSDVQLDWLLSWSYDTRHLVILDANMTSQAAAPVQNV
PPSVMWEYLVSHNRIDAALNWLFEHISSKKELVTPPDDISYRQIFHIVKTHGTNYLQELV
QTLLAANGILDPSLLTHNFAMFLHLLNHLKGVLKLPSPITEVKTCSIELRQFHQDMIAYC
TKNNFGYLLWKYCQIHKISPKQLSLQYFESNEDMWMKMFNSFYALSINPYDTSPIYEASL
SNAAVVWNLKEPSVTDLIQEGHVLAALATILYGNDLLTSMTASSTVPDIFQGIDMNLLED
SLLHYPRLHDALFPTSVKKVCQYDITVYQLMKGNTPFDPAWLYGWQNTNTSVVEENLKVM
PHFSLPELVSKYAQHEDIDFTYYLRQGRPTFAFCSFLTDEFNHGTVIAQHRVQYACQIAT
KLAVKYFSQSQVSASCAAFVEMLGVDSILLRLLVNIGNKIVAYRMNKLKSWGGSVQWRKD
YNQQFEQETGQLLMGCLKRKRNSASELLNTLEDATEYDIEKEEVSPFGFEAGHLWTQSIL
LCYHLHLPYSTRFLENCAKTNNWLPFLWFAQLHQYPKDQLLQLVPWFPSPHLRDHIFYIV
NNAQNNLFTETEETTTKTDLEIKKPATKAFRYGFYSKIGVASDTGQSSSDEDDALIINSN
KEENKETNQEFDLNPMSAPEDVFRVIFSAQASRSVWKSLLSYGIALRNPLFTELAACQRE
ANILSCLCGWLIAVMNDLQHQHFLKQHVLPVTKWNLKDLRELTEIFIRNKWLANLTVGFA
IFQTDTPMAFFLKFLHCCLEKYDYAEAQIYLESFKHSVLYKPSKDKMSSINHMAQVFPMV
GDISWQEETCQCLIRELLTGLPNISDVVKLLKYLTQYNIISVFTYQPGLNYSQLLQVAEI
LQKNQLTIPFSSFLVKDRQHLATQVEPLVAEIVNKKLYDDARMLCEFADINHEEITFTEI
NNEKSKLQKSHCWLSEFIRVNFWKDCLAKFNRYGVSPMRIVQFFQDEINKCNQNNTNMNE
QAIMYELCVQSLIDAPDPSGNLYANYINDLSHKMWYCRIMAKVPKVERIPSLVAPIDEIF
SGVEETYPVQSKTSALKTELLQHGKMPNISQKQSEFSDSEQRAVSLLIGELLSEAHLSDC
CRVAAEFSFYSQDLAIILTCIRLSIGSISVDEIAPEIKQLLLESADINKNPATKFSRQFN
NGTSFFRLSNASLGSLTGVGNLTLSPAQDQLISVMEQLFSLCVQGKECCRRVLIAKKIAL
ILEKKYEFVITSDEFTILEMLLKVNNNARFQLAKEFLATSTVSDNQLAGFLSDAIIKSLK
VCAPELRSPSLNSPSSVCNDLIFNPIAGGESYQILQLCQDPSQLGNRLLDAVASLASDTS
QDILTVQTNMLILAHHCHTSACNMEGISNVLRAARVLNQRLSQAEEFNLMISLLTGVGRF
NEMTYIFDALKQHHQFELLMRKGMEKEDQLRSAILDYLKRFHPNDSDSYTMVALNFTMFR
EIGQMLEELAQKNLDILKRKPLVNSSEVVLLLQKIHQYFSDAAKSYMKDNILRHAEYCVR
QARLLLLQMDLLPAGIHVINLTPEEATNFIKEHPKFSEALIVSEAYNRNAVWSEALCNRI
IIHGDFRYLQDLKAYIRLNPSLIIDTIDRYKQMTQKPPQCLDNIKKLLTHCKDIRLQYQL
GKELELKDFITQLEDGSNSAYILDLEALRGSSHFSF
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacggtgaaagcgattccgactttttggaatacaaactttgctctttccag
gacgaattgtctctggacgggattaaaaacattctactatgtcctcgctaccacatcctt
gtcattctctataacgatgccaatttacatgttttccgcgcatcggacacccgacaacaa
ctgaaaactgtgcccaacatcagctcaattcattatgacagcaatgaacatcatgagact
acattgtgtatgcaccacatagatggtaaattgtcagctttttccttggaggatgatctg
agatatctttttacttgtgaggaatctgtattggctctggtgctatgtaaagaaggtctt
gaactctttaaatctactgcaccttatttacttggttatgcacactcttcagttatttta
cttaccaagaaaaggccaactaattgccaagctagttctgatgccatcgctactactact
acccttaccatagcttgtgtgtattttaccagtgaagcatcacagaaaccctgctgtcag
tacactattgtattgtcagaccaatttgaagaggatcatattgtgccatcagttcaactt
tatgagtcaactatatctgttctaaactggccacaacacacactttatctatatgatagc
agtgatggagtatgttaccttcaggttgatctttgctctgttgttcacctctgtagcagt
atgccccggttttggtgtatgtcaaatgatgttgcacatctcttccttatcactgaaata
aactctgctatctgcctctctttgaaggatttatacactttatgtccagcagactgcaaa
ttcttttttccatccaataacctttcacaagacagagaatacaaaaagtggatacgcatt
cataaatatggttattgtttgccagtgatccaaagaggccagttttctaatgtatcatgt
cttggaaaagttgttaaaagaagagtatctggattgaaaaaatgtctttcatcagcaact
ctggatgaaaaaattaaagtagtacaacttccagaattcctagaacaacatagtgtcaaa
gaaattgctttgtcaacaacatcagcaaaagtgctgttctccaagagagacaacatagat
ctatcaattttatggctgtgtgactttacaactggcaatgtcaaattaaaacgttttaaa
aaagagactggtctccttgtactgggtatggaaaaatgtcacccacctcttatcctaaaa
gaaactggaatatttgcaatagttgatgagcttcaccaagaggaatttgtggataaggtt
atgacttatggcggagctcgtttcactgatgaactgtgccagatgaatcattgggggcgt
tgttcattaccccttcgggctctggaacttggcttaaaatatcgacagattgacactgtc
accatattcctgcagactagacagaatttattctcacacgagaaaaaaactgatgggaat
gaacagaagaatggtaatgtaaatagctgtctgcctaaactgcaggcattagaaccagct
tatcgactgctattgcagagcattgaagacaacatggctgaacaacaatctttattcttt
gcacaacaactacttggtataatgttaaatcatttatattctgtgctaaatgacatcctt
gcgttcaagaattctttactagacaatattgcacttgaagtcttgcaagaaacagagtca
atgacccaaactgttctacagtatattgctaaagtacgcacatatatgaatgcttttggt
ttgaagaaacagaattctctgacagatgatgctaaaataggaatctgcacttcaatagaa
agcagtacagctgagtacaatgaatggtcagaaatggatgtgacggatgccattgaagat
agcattagaaaaaatactgtccctattgtccaatactaccttctccaacagaactctcca
gaattagccagtctttctgaagttactcgtttaggtttacttcaaggaattaaatatttg
atgaatgccaagtttgatgaagcatcactactcctatcaaatcttggttataaacctgta
gaaaaatattgggaatttgccctttacacaaatgattgcttgttaagagactgtattctt
aattatttcacggaaacaactgaagaacagcagaaattaattactttcttccatttatta
caacaaacttatccttgtatctcatatgaaaaggctaaagaaaatattttaccattaaat
ggctggaaagttgtggacgcgattgctgcttgcatgagtattgcaccatcttgtgttaat
atcaaagcatcctgtggagaagtgagcattaacaaacctgaggaatcggtgtctcctgta
acctccccatacagtgatgtgcaacttgattggcttttgtcttggtcctatgataccaga
catttggttattcttgatgccaatatgaccagtcaagcagctgctcctgtccagaatgtt
cctcccagtgtcatgtgggaatacttagtcagccacaaccggattgatgccgcattaaat
tggttattcgaacatatcagttcgaaaaaggaattagtcacaccacctgatgatatttct
tatcgacaaatttttcatattgtcaagactcatggaacaaactatctccaggaattggtt
caaactttactagcagcaaacggaattctggatccttcactattgactcacaattttgca
atgttccttcatttattgaaccacttaaaaggtgttttaaaacttccttccccaataact
gaagtgaaaacatgttccatagaattacgccaattccaccaagatatgattgcttattgt
accaagaacaactttggttatctgctgtggaaatactgccagattcataagattagcccc
aagcaattatctttgcaatactttgagagtaacgaagacatgtggatgaagatgttcaac
agcttttatgctttatctataaacccttatgacaccagccccatttatgaagctagcttg
tccaatgctgcagttgtttggaacttgaaggaaccatcagttactgacctcatccaagaa
ggtcatgttttagctgccttagcaactattctttatggcaatgacctgttaacctcaatg
actgccagctccactgttcctgatatattccaaggaatcgacatgaatcttcttgaagat
agcctacttcactaccctcggctacatgatgccttatttccaacttcagtgaagaaagtt
tgccaatatgatatcacagtttaccagttaatgaaaggaaacactccatttgatcctgcc
tggttgtatggatggcagaatacaaatacatcagtggttgaagaaaatttgaaagtgatg
cctcacttctctttacctgagctggtttctaaatatgctcaacatgaagacattgacttt
acatattatctgcggcaaggaagacctacatttgctttctgctctttcttaactgatgaa
ttcaaccatggcactgttatcgctcaacatagagtgcaatatgcttgtcagattgccacc
aaactggctgttaagtatttcagtcaaagccaagtgtccgcatcatgtgcagcttttgta
gaaatgcttggagttgatagcattttgcttcgtttgttggtgaacattggtaataagatt
gtcgcttatagaatgaacaagctgaaatcttggggaggctctgttcaatggagaaaggat
tataaccagcaatttgagcaagaaacaggtcagttgttaatgggctgccttaaacgaaaa
cgaaattcagcctcagagctgctcaatactttagaagatgctactgagtatgatattgaa
aaggaagaagtttcaccttttggttttgaagcaggtcatttatggacgcaatcgattcta
ttgtgttatcatcttcatctgccttactcgactagatttctagagaattgtgccaaaacc
aataattggttacctttcctttggtttgcacagttgcatcaatatcccaaagatcagctt
ttacagttagtaccatggtttcctagtcctcatcttcgagatcacatattctacattgta
aataatgctcaaaacaatcttttcacggagactgaagagacaactaccaaaactgacttg
gaaataaaaaaacctgctactaaagcatttcgttatggtttttatagcaaaataggagta
gcttctgacacagggcaaagcagttctgatgaagatgatgctttaataatcaattcaaac
aaagaagaaaataaagagactaatcaggaatttgatcttaaccctatgtctgctcctgaa
gatgttttcagagtaattttttctgcccaagcaagtcggagtgtttggaaaagtcttttg
tcatatggcattgcgttacgcaatcccttgttcacagaactagcagcttgtcaaagagaa
gctaacattctcagttgcttgtgtggttggttgattgctgttatgaacgatcttcagcat
caacacttcctgaagcaacatgttttgcctgttaccaagtggaacttgaaagatttacgt
gaacttactgaaatattcatcagaaacaaatggttagctaatctaacagttggatttgct
attttccaaacagacacacctatggcattcttcctaaaattccttcactgttgtctggag
aaatatgattatgcagaagctcagatttatctggaaagttttaaacactctgttctatat
aaaccatctaaagataagatgtcctctattaatcacatggcgcaagtatttccaatggtt
ggtgacatttcatggcaagaggaaacttgtcagtgccttattagagagctgttgacaggt
ttgccaaatatctctgatgttgtgaaactcttgaaatacttaactcagtataatatcatt
tcagtattcacatatcaaccaggtttgaattactctcaacttttgcaagtggctgaaatc
cttcagaagaaccaactcactatcccattctcctctttcctggtgaaagatcgacaacat
ttagccacccaggtggagcccctagtggcagaaattgttaacaagaagctctatgatgat
gctcgtatgttgtgtgagtttgctgatatcaatcatgaagaaataacatttactgagatt
aataatgaaaagtcaaagctacagaaaagtcattgctggttgtctgaatttatccgtgta
aatttctggaaagattgtcttgcaaaatttaatagatacggtgtatctcctatgagaatt
gtgcagtttttccaggatgagattaacaaatgtaaccagaataacacaaacatgaatgaa
caggccattatgtatgaactctgtgtacaaagtttgatagatgcacctgacccttcagga
aatctctatgctaattatataaatgatctcagtcataagatgtggtattgcagaattatg
gccaaagtaccaaaagttgagcgaatcccttcattggtggcacctattgatgagatattt
tcaggagttgaggaaacatatccagttcaatcaaaaacatctgcattgaagaccgagctt
ctgcagcatgggaaaatgcctaatatatctcaaaaacaaagtgaattctctgatagtgaa
caaagagctgtaagtctattgattggtgaacttctcagtgaagcacatctgtctgactgc
tgtagagttgctgctgagttttcattctatagtcaagaccttgctatcattttgacttgc
atccgactcagcattggttccatcagtgttgatgaaatagcacctgaaataaagcaactt
ctgctagagtctgcagatatcaacaaaaatcccgccaccaagttttctcgacagttcaac
aatggcacatccttctttcggctttctaatgcaagtcttggtagcctgacaggtgttggt
aatttgactctgtctcctgctcaagaccaactcatttctgtaatggagcaactgtttagt
ttgtgtgtccaaggcaaggaatgctgtcggagagttttgattgcgaagaaaatagctctg
attttagaaaagaaatacgagtttgtgatcacatcagatgagttcacaattcttgaaatg
ctactgaaagtcaataacaatgcccgttttcagttagctaaggaatttcttgcaacaagc
acagtctcagacaatcagcttgctgggttcctgtctgatgctataataaaatctctgaaa
gtgtgtgcccctgaattgagaagtccaagtctaaattctccatcatctgtctgcaatgat
cttatctttaacccaattgctggaggagaaagttaccaaattcttcaactatgtcaagat
cccagtcaacttggcaaccgcttattggatgcagtagcttcattagcatcagatacaagt
caagacattttaactgtacaaactaatatgcttatcctggcccatcattgccacacatca
gcatgtaatatggaaggaatttctaatgttctaagagctgctcgtgttttaaaccagcgc
ctttcacaggctgaagaatttaatttgatgatcagccttttaacaggtgttggccgcttc
aatgagatgacctacatatttgatgctctgaagcaacatcatcagtttgagctgctgatg
aggaaaggaatggaaaaggaagatcagctgaggtctgcaattttagattacctcaaacgt
tttcatcccaatgacagtgacagttacaccatggtggccctaaattttacaatgtttaga
gagattggtcaaatgcttgaggagttggcccaaaagaatttggatatattaaaaaggaaa
ccactagtgaactcttcagaagttgtattgttgttacaaaagattcaccaatatttttct
gatgctgcaaaaagctatatgaaggataatatcctccgccatgctgaatattgtgtccga
caagctcgtttgcttcttctacagatggatctcttacctgctggtattcatgtcatcaat
ttaacacctgaagaagctaccaatttcattaaagaacatcctaagttctctgaggcattg
attgttagtgaggcttacaatagaaatgcagtttggagtgaagcactttgtaatcgcatc
attattcatggagactttcgctacctgcaagatttgaaagcctatattcgactgaatcct
tccctcattattgataccattgacaggtacaaacagatgacacaaaaacctcctcagtgt
ttagataacataaagaaacttttaacacactgcaaagatatacgtcttcagtatcagctt
ggaaaggaactggaactgaaagatttcatcactcagcttgaagatgggtctaattctgca
tatattctagaccttgaagctttaagaggaagtagccatttcagcttttga
DBGET
integrated database retrieval system
