Octopus bimaculoides (California two-spot octopus): 106869790
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Entry
106869790 CDS
T04127
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106869790
03015 mRNA surveillance pathway
106869790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106869790
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106869790
mRNA cycle factors
P-body specific factors
106869790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
106869790
NCBI-ProteinID:
XP_014771136
UniProt:
A0A0L8HM84
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All DBs
Position
24:complement(10322219..10366903)
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AA seq
1216 aa
AA seq
DB search
MKSAAELEALWQKEEEEKRKLEEEKKKQEEEMRLQEELLRKKKEAEEAQIQEELRTIQDY
IQEVKERLDQKNYLRGKNLNAAENRPDETFFSKLDSNLRRNTAFVRKLRNLTESLKDSLT
KDIQSLNLSKYIGEAAAALTEAKLKMSDINCAVLICSLLHQRYADFSSCLMENWQKYLLC
KKEERIANLSKYRVDLRFFAELVSVGLFSEKEGLHVLANQLSILVNSDKEEHNNLSIISS
FCKHCGDDYVGIVPRKYRILAEKHNLEIERSNMLPPERQKACRNLLKEYYATLCKHLKKL
HKDLKTIEQQNRKILQTKGELSNERKENYETAIVNYQKLQQNTYTLADLLDEEIPDLPEE
ELKQDSEGAMFDIFNPIKNAEFHYEGDTSLFEDEDTRTFYESLPDLRSLIPGILYKESEH
ASSKDETKEDVTALEEDIETLKIEDIDPEIEFEQKELPVETLVKDKDDNKERLKDDDIEE
ELDMIHQPDIEEEGDTGHLMKAQFDTFLQSLPNCVNRELIDKNAVDFCMSFNTKTNRKKL
VRALFTVHRTRYDLLPFYSRLVATLYPCMPDVANDLVHLLKGDFRWHIRKKDQINIESKL
KTVRFIGELVKFKMFPKTETLFCLKNLLVDFTHHNIEMACALLETCGRYLYRQMDSHHRT
KVYLDVVMRKKAALHLDSRYITMIENAYYYSNPPEVPQMVKKVRPPMHEYIRKLLYKDLS
KVTTEKVLRQMRKLDWDNPEVAFYATKCLTAVWNIRYNSIHCAANLLAGLAPYHELVAIQ
VVDGILEDIRIGMEINHPKYNQRRVSAIKYLGELYNYRMVESSVIFKVLYSFISFGISLE
DNVPSALDLPDHLFRIRLVCVLLDTCGQYFDKGSSKKKLDYFLVYFQRYYWFKKKLPLWT
EDHPFPVDVDNLVRDTIEAVRPKLKLLESEEDAYKAVDDLEKEIKAKIAEVLPIIDTFDE
METNGLEECGFSTIIESDEELSQNLSQVNNDETLIESETSQDDPSQSRTGSQVNDGEDYA
NSVHSEEDEEEDLLESAGEDETEDQVTVLTGGPKHIKCTEDEDFLSAFDKMMADNLQARS
QESLKVPQLDIAVPMHLRGQVRKQFTFPQNNIEYNDTIKFVLMTKKGNKQQYTNLNVPIS
TEFAAKFKERERAERAEKEQMKQVVLGIHERQEEEDYQEMLAALNRPAPVNTNRERRVRY
QHPKGAPDADLIFGSK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggctgctgaactcgaggctctgtggcaaaaggaagaggaggagaaaaggaag
ttggaagaagagaaaaagaagcaagaagaggagatgcgcctacaagaggaacttcttcgg
aaaaagaaagaagctgaagaagcgcagattcaagaagaattgaggacgatccaagattat
atacaagaggtgaaagagagattggaccagaagaattatttacgaggcaagaatcttaat
gctgcagagaatcgtccagatgagacatttttcagtaagttggactctaacctcagaaga
aatactgcttttgtgaggaagctgcgtaatttaacggagtcactgaaggactctctgacc
aaagatatccagagtttaaacctttccaagtacatcggagaagcagctgcagcacttact
gaagccaaactgaagatgtcagatatcaactgtgccgtccttatttgcagtctccttcac
cagcgctatgctgatttttcttcctgtttaatggaaaactggcagaaatatctcctttgt
aagaaagaggaaaggattgcaaacttaagtaaatacagagtagatttgaggttctttgct
gaacttgtgtctgtcggtttgttttccgaaaaagaaggtctccatgtgttggccaaccag
ctttccatcttagtgaacagtgataaagaggaacacaacaatctctccatcatatccagt
ttttgtaaacactgtggagatgattacgttggaattgtacccaggaaatacagaatttta
gctgagaaacacaatttggaaattgaaagaagcaatatgctgccaccagagcgacaaaaa
gcatgcaggaatttgctgaaagaatattatgccactttatgtaaacatttgaaaaaatta
cacaaagatctcaaaactattgagcaacagaatcgaaaaatactccagacgaaaggggaa
ctgagcaacgagaggaaagaaaattatgaaacagctatagtaaattaccaaaaattacaa
cagaacacatacacactcgcagatcttcttgatgaagaaatccctgacctgcctgaagaa
gagcttaaacaagattcagaaggcgctatgtttgacatcttcaaccccattaaaaatgct
gaattccattatgaaggagatacaagcctgtttgaggatgaagacactagaactttctac
gaatccttacctgatctcagatctcttattccagggatcctatacaaagaaagtgaacat
gcgtcatctaaagatgagaccaaagaagatgttaccgccttggaagaagatattgaaact
ctgaaaattgaagacattgacccggaaatcgaatttgaacagaaggaactccctgtagag
acgctcgtgaaggacaaagatgacaataaggagcgtttaaaagacgatgacatcgaggaa
gaattggacatgattcatcagccagatatcgaagaagaaggtgacacgggccatctgatg
aaagctcagtttgatacttttcttcagtctttaccgaattgtgttaacagagaactgatt
gacaagaatgcagttgatttttgcatgagcttcaataccaagacaaatagaaagaaattg
gtcagggctcttttcacagttcacagaaccagatacgatttgttacctttttactcccga
cttgtggctactttgtacccttgtatgccagatgttgccaacgatcttgtacatttgctg
aaaggagactttcgctggcatatacgcaagaaagaccaaattaacattgaatccaagttg
aaaactgtacgttttattggtgaactggtgaagtttaagatgttccccaagacagagaca
ctattttgtcttaagaatttattagtggatttcactcaccacaatatagaaatggcttgt
gctttgctcgaaacgtgtggacgatatctttacagacagatggattctcatcatagaact
aaagtctatcttgacgtggtgatgcggaaaaaagctgcccttcatttggatagcaggtac
atcacaatgatagaaaatgcttattactacagtaatccacctgaagtaccgcaaatggtg
aagaaagtacgccctcctatgcatgaatatatacgcaagctactttataaagatctgtca
aaggtcaccacggaaaaggtattacggcagatgaggaaattagattgggataatccagag
gttgcattctatgctaccaagtgcctgacagctgtttggaatatccgttacaattccatt
cactgtgctgccaacctcttggctggcttagccccatatcatgagcttgttgctattcaa
gtggttgatggtatcttggaggacatcaggattggaatggagatcaaccatcccaagtac
aaccaacggcgagtcagcgcaatcaaatatctcggagaactctacaactatcgcatggta
gaatcttctgttattttcaaagtcctttattcgttcatctcttttggaatatcattagaa
gataacgtaccttctgctctggaccttcctgatcatctgtttcgcatccgtttggtttgt
gttctgctcgacacttgtggacagtattttgataaaggttccagtaagaagaaattggat
tatttccttgtatatttccagaggtattattggttcaaaaagaaacttccattgtggaca
gaggatcatcctttcccagttgacgttgacaatttggtgagggacaccatcgaagctgta
cgtcctaagctgaagctactggaaagtgaagaagatgcgtacaaggcagttgatgatctt
gagaaagaaatcaaagccaagattgctgaagttctaccaatcatcgatacatttgatgag
atggaaactaatggcttagaggagtgtggtttcagtaccatcattgaaagcgatgaggaa
cttagtcagaacctttctcaagtcaacaatgatgagaccctcattgaaagtgaaaccagt
caagatgatcccagccagagtcgtacaggaagtcaagttaatgatggtgaagattatgca
aatagtgttcatagtgaagaagatgaagaagaagatcttcttgagtctgcaggagaagat
gagactgaagatcaggtcaccgtgttgactggagggccaaaacatatcaaatgcactgag
gatgaagatttcttgtctgcttttgataaaatgatggctgataatcttcaggccagatct
caagagtcattgaaggtaccacaattggacattgctgttccaatgcatctgaggggacaa
gtgcgtaagcaatttacattccctcagaataacattgaatataatgataccataaagttt
gtacttatgacaaagaagggcaacaaacaacagtataccaacttgaatgttccgatttct
actgagtttgctgccaaatttaaagaacgagaacgggctgagcgagcggagaaagaacag
atgaaacaggttgtccttggtatccatgaacgacaagaagaggaagattatcaagagatg
ttagctgccctcaacagaccagcacctgtgaacactaacagggagagacgtgtacgttat
caacaccccaagggtgctcctgatgcagacttgatcttcggatcaaagtga
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