KEGG   Octopus bimaculoides (California two-spot octopus): 106870199
Entry
106870199         CDS       T04127                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03420  Nucleotide excision repair
obi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    106870199
   03460 Fanconi anemia pathway
    106870199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obi03032]
    106870199
   03400 DNA repair and recombination proteins [BR:obi03400]
    106870199
DNA replication proteins [BR:obi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    106870199
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106870199
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 106870199
NCBI-ProteinID: XP_014771689
UniProt: A0A0L8HK36
LinkDB
Position
4:complement(50642442..50688332)
AA seq 873 aa
MPLLEYEKEIFLNCFHDDGLLIMSQGLGLERILINLIKVYCDPGNLVFVLNNNNVEEDYI
CDHLKADGVKEVPKVITNEFTAPNRQKIYTEGGVLFVTSRILVVDFLTENIPANLITGII
VCKAHKILDSCQEAFILRLYRQKNKTGFIKAFSDRPSGFTTGFAHVENVMKNLFLKKLFL
WPRFHANVASCLDKHKIEVVELHIQMTSTMVACQTALLDLINACISDLKRFTSAIDFDEI
TVENAIGKSFDIMIRHQLNPIWNQLSSKAKQIVSDLKTLRMICQDLTQYDCVTFFSVVNS
ICTSEKTFGENSGWLFLDSADSLIVNSKMRVYKTSKSSKKKEDSKLKGVASENRENESIP
DLEIPPKWTGLSEILAEIQNENAELDPDFGRGKILIVAEDDRTCNQLREFLSRGGKNTLA
SLYNKYLASKGKYMEVTSPKKKKQKITKTKSTKEATSVELTEMEPEDIASRLNTEEEINE
EENFRCSSQDAYYGILSQPAVIIHPIHGGSDSLGLQRTLWEINPHYVILYDSCMKFVREL
EVYHATRPHVPLRVYFLIYSNSVEEQQYLTTLRKEKEAFEFLIKEKALMVIPEERDGKLE
NDPNLHAVSALQAPTSSRKGGMEVKAENHKIIVDMREFRSELPSLLHRRGIDIEPITLEV
GDYILTPDICVERKSISDLIGSLSNGRLFNQCVAMSRHYKRPVLLIEFDTNKYFSLNKYQ
LDNDVSIRDNTSRLALLTLHFPNLRILWCQNPFATAELFHELKVGREQPSASAAIAVSET
TDYIDKYNPKPQDFLLKLPGVNLKNYRLIMNKVTNIYELSRLTEEELTEILGNASNAQQL
LGFLRSKADGLHQVSHSSAPSKPEKKRPFKRKL
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgccgctcttagaatatgaaaaagaaatatttttgaattgtttccacgacgatggatta
cttattatgtcacagggccttggtcttgaaagaatattgataaacctaataaaggtctac
tgtgaccctggaaatcttgtctttgtgctgaataataataatgtggaagaggattacatt
tgtgatcatctaaaggctgatggtgtgaaggaagtacctaaagtcataacaaatgaattt
actgcaccaaacaggcagaaaatttacacagaaggaggtgtgttgtttgtgacttcaaga
attcttgtcgttgactttctcacagaaaatattccagcaaacctcatcacaggcattatc
gtctgtaaagctcataaaatcttggattcatgtcaggaagcatttattctcagactttat
cgacagaaaaacaaaactggttttatcaaggctttttctgaccggccttctggtttcaca
actggttttgcccatgttgaaaacgtaatgaaaaatctttttctcaagaaactgttcttg
tggccacggttccatgctaatgttgcaagctgcttagataaacataagatagaggttgtt
gagctgcacatccagatgactagtacaatggttgcttgccaaacagctcttcttgatctt
attaatgcctgcatctctgatctcaaaagatttacctctgctattgattttgacgagata
acagtggaaaatgcgattggcaagtcctttgatattatgattcgacatcaactgaatcct
atttggaaccagctcagcagcaaagccaagcagattgtctctgatctcaaaaccttgagg
atgatttgccaagatttgacccaatatgactgtgtcacattttttagtgtggtgaattct
atttgtacaagtgagaaaacatttggggaaaattctggttggctttttctggactcagct
gatagtctgattgtgaactcaaagatgagggtttacaaaactagcaaaagttctaaaaag
aaggaagattctaaactgaaaggtgttgcatctgaaaacagagaaaatgagagtattcca
gacttggaaatcccacccaaatggactggtttgtcagaaatccttgctgagattcaaaat
gagaatgctgaactggatcctgactttgggagaggaaaaatcttaattgtagctgaagat
gaccgaacttgtaatcaactgagggagtttttatcaagaggtggtaaaaatactctagct
tctctctacaacaaatatttggcatcaaaaggcaaatatatggaagttacatctccaaag
aagaagaaacaaaaaataacaaaaacaaaatctactaaagaagcaacttcagttgagttg
acagaaatggagccagaagacatagcttcaaggttaaacactgaagaggaaatcaacgag
gaagagaatttcaggtgttcttctcaggatgcttactatggaatcctttcacaaccagct
gtcataatccatccaatccatggcggctctgattctcttggattgcagcgtactctctgg
gagataaacccacattatgtaatcctgtatgattcctgcatgaagtttgtgagagaactg
gaggtctatcatgctacaaggccacatgttcctttacgggtctacttcttaatatacagc
aattctgttgaagaacaacagtatctaactactcttcgtaaagaaaaagaagcctttgag
ttccttatcaaagaaaaggctctaatggtaatccctgaagagagagatgggaagcttgaa
aatgatcctaacttgcatgcagtttctgcacttcaagcccctacttcttctcgtaaagga
ggaatggaagtgaaagcagaaaatcacaagatcattgttgatatgcgagaatttcgcagt
gaactaccttcattgttgcatcgacgaggtattgatatagaacctattacgttagaggtt
ggagattacattttgacccctgacatctgcgttgaaagaaaaagcataagcgatttgatt
ggttcactcagtaatggacgtctgttcaaccagtgtgttgccatgagccgacattacaag
cgacctgttcttcttatagagtttgataccaataaatatttttcattaaacaagtaccag
ttggataatgatgtctctattcgtgacaatacctcacgtcttgctcttctcactcttcat
tttccaaatctccgaatactttggtgtcaaaacccttttgcaactgctgaattgtttcat
gaattaaaggttggaagggaacaaccttctgcctctgctgccatcgctgtgagtgaaaca
acagactatattgataaatacaacccaaagcctcaggactttcttctgaaattacctgga
gtcaatttgaaaaactatcggcttattatgaacaaagtgacgaatatttatgaattgagc
cggctgactgaggaagaactgacagagattttgggcaatgctagtaatgcacaacagttg
ttaggatttctaaggtcaaaagcagatggtttgcatcaggtaagccattcttcagcacca
agtaaaccagagaaaaaacgaccatttaaaagaaaattatga

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