Octopus bimaculoides (California two-spot octopus): 106870562
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Entry
106870562 CDS
T04127
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03030
DNA replication
obi03410
Base excision repair
obi03420
Nucleotide excision repair
obi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106870562
03410 Base excision repair
106870562
03420 Nucleotide excision repair
106870562
03430 Mismatch repair
106870562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106870562
03036 Chromosome and associated proteins [BR:
obi03036
]
106870562
03400 DNA repair and recombination proteins [BR:
obi03400
]
106870562
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106870562
DNA Replication Termination Factors
ELG1-RFC complex
106870562
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106870562
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106870562
Check point factors
HRAD17(Rad24)-RFC complex
106870562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
AAA_11
AAA_24
Mg_chelatase
nSTAND3
AAA_19
RuvB_N
Rad17
AAA_assoc_2
AAA_5
MipZ
AAA_25
DNAX_ATPase_lid
AAA_18
MeaB
AAA_30
AAA_28
bpMoxR
ABC_tran
AAA_23
NTPase_1
FtsK_SpoIIIE
RNA_helicase
AAA_3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
106870562
NCBI-ProteinID:
XP_014772174
UniProt:
A0A0L8HHW0
LinkDB
All DBs
Position
1:71497351..71510570
Genome browser
AA seq
347 aa
AA seq
DB search
MAGEEEMIVDTPEKNTTQPKKSGGFELPWVEKYRPILLKDIIGNEETVTRLAIFAKEGNV
PNVIIAGPPGTGKTTSILCLARALLGSSFKDAVLELNASNDRGIDVVRNKIKMFAQQKVT
LPKGRHKIIILDEADSMTGGAQQALRRTMEIYSKTTRFALACNSSDKIIEPIQSRCAVLR
YSRLTDAQVLSRLLTICEKETVSYTDDGLQAIVFTAQGDMRQGLNNLQSTFQGFGHVNSE
NVFKVCDEPHPLLIKDMLQHCVDGKIDEAYQVMSHLWKLGYAPEDIIGIVFRVSKTFNMA
EYLKLEFIKEIGYTHMRIVQGVNTLLQLSALLARLCKISAIAKEDSQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaagaagaaatgattgttgacactcctgaaaagaatacaactcaacccaaa
aaatctggtggtttcgaactaccatgggtagagaagtatcgtccaattctgctaaaagat
atcatcggaaatgaagaaactgtaacccgtcttgcaatttttgccaaagaaggcaatgtt
cctaatgttataatagcaggtcctccaggaacaggaaaaacaacaagtatcctctgcctg
gcacgagctctgcttggatcatcatttaaagatgctgttttagaacttaatgcttctaat
gacaggggcattgatgttgttcgcaacaaaataaagatgtttgctcaacagaaagtaact
ttaccaaagggaagacacaagataattattttagatgaagcagacagtatgactggtggg
gcccagcaagctttaaggcgtactatggaaatttattcaaagacaactcgatttgcgctt
gcttgtaattcatcagacaaaataattgaaccaatacaatcacgttgtgcagtgttgcgt
tattctcggttgacagatgcacaagttttgtcccgattattgactatttgcgaaaaagag
acagtcagttatacagatgatggattacaggctattgtattcacagcacaaggtgatatg
agacagggcttgaataacctgcaatctacttttcaaggatttggtcatgttaatagtgaa
aatgttttcaaagtatgtgatgaaccacaccctttgctaataaaagacatgctgcaacat
tgtgttgatggtaaaatagatgaagcctatcaagtcatgtcacatctctggaaattggga
tatgctccagaagacattattgggattgtgtttcgtgttagcaaaacatttaacatggca
gaatatcttaaactagaattcattaaggagattggttatacacatatgcgaattgttcaa
ggtgttaatactttgctacagttgtctgctcttctggccaggttgtgtaaaatttctgcc
atagcaaaagaagattcacaataa
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