Octopus bimaculoides (California two-spot octopus): 106870628
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Entry
106870628 CDS
T04127
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obi03009
]
106870628
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106870628
Ribosome biogenesis [BR:
obi03009
]
Eukaryotic type
Pre-60S particles
Helicases
106870628
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
DnaI_N
Motif
Other DBs
NCBI-GeneID:
106870628
NCBI-ProteinID:
XP_014772249
UniProt:
A0A0L8HI07
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Position
2:91448532..91477756
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AA seq
544 aa
AA seq
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MDDEECEVPFHAMGLDDRVLQSIANLGWSNPTLIQEKAIPLALEGKDILIQAKTGSGKTA
AFAIPIIQKILLSKQSALEQSVRAIVVTPSKQLCAQACKVIKELSDCCATEIQCVDISPK
EPLPVQKPILMEKPDIVVGTPSRILAHIGVNNLFLKDSMEFLVIDEADLLLAFGYINDMK
ALLKHFPKIYQSLWVTATLNTDINTLKKMILHNAVVLKLEEPQIPEHLMQYHIMVEDDDK
YALMCALFQLKLIRGRSLIFVNTIDESYRLKMFLQQFGIKSCILNNEMPLSSRCNIVDEF
NRAVYDNIIATDEQIFEDDAEDTKKKTKKGNDGCGVSRGVDFYNVSNVVNFDFPESVNAY
IHRIGRTARAKQKGTALSFVNSKEKEIFDEVKQVIIQESGDSGSHFKPFNFNMKRIEGFQ
YRSKDALNVCTRKAVKEARLKEIRQEVLNSKKLNSFFQAHPRDKEVLHHDAKLQFSQKCL
KLENVPDYLVPTTLKNSINNSPGVKKIQPISHQRTSKKKKRKYQADPLKNFTLSSSKKKK
HKKY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaagaatgtgaagtaccttttcatgcgatgggactggacgatagagttctt
cagtccattgcaaaccttggctggtcaaatccaaccctaatccaggaaaaagctatccca
ctagctttagaaggaaaagatattttaatccaggctaaaactggatctggaaaaactgct
gcttttgcaatccctatcattcagaagattttattgtcaaaacaatcagcccttgagcag
tcagtgagagccatagttgtaacaccatctaaacagctctgtgcacaagcctgtaaagtt
ataaaggaactcagtgattgttgtgcgacagaaatccagtgtgttgatatcagtcctaaa
gaaccacttcctgttcaaaagcctattttaatggaaaaacctgatattgttgttggcaca
ccatcaagaattcttgctcatattggtgtaaataacttatttctaaaggacagcatggaa
tttctggttattgatgaagcagacctacttctagcatttggttacatcaatgatatgaaa
gctttactcaagcatttccccaaaatttatcaatctctttgggtcactgcaacactgaat
actgacatcaacactttgaaaaagatgatattgcataatgctgtggttttgaaacttgaa
gaacctcagataccagaacacttaatgcaatatcacattatggtggaagatgatgacaaa
tatgctttgatgtgtgctctgttccaactgaagttaattcgtggaagatccttaatattt
gtcaacacaattgatgagtcctacagattgaaaatgttcctgcagcaatttggaataaaa
tcttgtatacttaataatgagatgccattaagttctcgatgtaacatagtagatgaattc
aacagagcagtatatgataacataatagctactgatgaacagatttttgaagatgatgct
gaagacactaaaaagaaaacaaaaaagggaaatgatggctgtggtgtttcacgaggtgtt
gatttctacaatgtctcaaatgttgtcaactttgacttcccagaatctgtgaacgcttat
attcatcgcattggaagaactgctcgtgctaaacagaaaggtacagctttatcatttgta
aatagtaaagagaaggagatctttgacgaagtcaagcaagttataatacaagaatcagga
gatagtggaagccattttaaaccattcaacttcaatatgaagagaattgaaggttttcag
tacagatcaaaagatgcattgaatgtctgcacaagaaaagctgtcaaagaagcaagactg
aaagaaattcgacaagaagtcctaaattccaagaaattaaattcatttttccaagctcat
ccaagggataaagaagttttacatcatgatgcaaaattacaattttctcaaaaatgtttg
aagctagaaaatgttcctgattatttagtacctacaacacttaaaaattctataaataat
tcacctggtgtcaaaaaaatacaaccaatttctcaccaacggacttcaaagaaaaagaag
agaaaataccaagctgacccattaaagaactttacattaagttctagcaaaaagaaaaaa
cataaaaaatattga
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