Octopus bimaculoides (California two-spot octopus): 106870699
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Entry
106870699 CDS
T04127
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106870699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106870699
Spliceosome [BR:
obi03041
]
Complex B
Other components
Prp19-related factors
106870699
Complex C
106870699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf_CCCH_4
Nup35_RRM_2
Torus
zf-CCCH_2
zf-CCCH
RRM_occluded
zf-CCCH_3
zf-CCCH_4
SpdB
zf-CCCH_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
106870699
NCBI-ProteinID:
XP_014772353
UniProt:
A0A0L8HH02
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All DBs
Position
6:80549599..80567108
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AA seq
436 aa
AA seq
DB search
MATSKSANTYNRQNWEDSEFPVLCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNICQTCLLDLDYGLPVQVRDAALKLQDNIPKSDVNKEYYTQN
IEREINNSDGTTAAGALAKATAPSDMLLKLARTAPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPNDPLADQNIKDRYYGLNDPVADKLIKRYATMPKLEPPEDKTITTLYVGNLG
VRIAEKELRDHFYQFGEIRSINVVSKQHCAFVQFTSRSAAELAAERSFNKLIILGRRLNI
KWGRSQAQQTLMKKEDIENENLLEPVPGLPGALPLPPEELTNNYFNLGQPPPLVPPPPPQ
GVPPRIPPPMAPPFNNMPRGPPPPPPGVRLPPPPPGILPVRPPPLIPPRTTQLNSVHYPS
QDPTRMGAVTVTNQKT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctacttccaagagtgccaacacttacaacagacaaaactgggaagattcggaattt
ccagtgctctgtcaaacatgtcttggagacaatccttatataagaatgatgaaagaaaaa
tatggcaaagaatgcaagatatgtgcacgaccatttaccgtgtttcgatggtgtcctggt
gccagaatgaggttcaagaaaactgaagtgtgtcagacttgttccaagttgaagaatatt
tgccagacatgtctcttggatttggattatggtctccctgtgcaagtccgagatgctgct
cttaaactacaagataacattcctaagtcagatgtcaataaagaatactatactcagaat
attgaaagagagatcaataacagcgatggcaccacagcagcaggtgctttagccaaagct
acagctccaagtgacatgttactgaagttggcaaggacagcgccttattataaacgcaac
aggccacatatatgttctttctgggttaaaggagagtgtaaacgtggagaagagtgtcct
tacaggcatgaaaaacccaccgatcccaatgatccactggctgatcaaaacattaaagac
agatactatggccttaatgatcctgtagctgataagctgatcaagaggtatgcaaccatg
cccaaactagagccacctgaagataaaactatcacaacattatatgttggaaaccttggt
gtccgtattgcagaaaaagaactgagggaccatttctatcagtttggggaaatccgttct
atcaacgtggtcagtaagcaacactgtgcatttgttcagtttacaagccgttctgctgca
gagttggctgcagaacgttctttcaataaactcatcatccttggccgacgtctgaacatt
aaatggggaagatctcaggctcaacagactttaatgaagaaggaagatatagaaaatgag
aatcttctggaacctgtacctggtttacctggtgcattaccattgccacctgaagaactg
accaacaactattttaatcttggccagccaccaccactggtacctccaccaccaccacaa
ggtgtacctccccgtattccacccccaatggcaccaccgtttaacaatatgcctcgaggt
ccacctcctccaccaccaggtgtcagactacccccaccaccacctggaatattacctgtg
cggccacctccactgatcccacctcgaactactcagctcaactctgtccactatccatca
caagacccaacacgtatgggagcagtaactgtcaccaaccagaagacctag
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