Octopus bimaculoides (California two-spot octopus): 106871005
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Entry
106871005 CDS
T04127
Name
(RefSeq) nuclear cap-binding protein subunit 2B isoform X1
KO
K12883
nuclear cap-binding protein subunit 2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106871005
09122 Translation
03013 Nucleocytoplasmic transport
106871005
03015 mRNA surveillance pathway
106871005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106871005
03041 Spliceosome [BR:
obi03041
]
106871005
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
106871005
Spliceosome [BR:
obi03041
]
Common components
Common spliceosomal components
Cap binding complex
106871005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
106871005
NCBI-ProteinID:
XP_014772745
LinkDB
All DBs
Position
27:complement(20805779..20816790)
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AA seq
164 aa
AA seq
DB search
MNASMFGEKRKPIGAIALGSYRDQHFKGSRFEQEQALLTSTTLYIGNLSFYTTEEQIHEL
FSRCGDVKRIVMGLDKGSRTPCGFCFVEYYERPDAENAMKYVNGTRLDDRIIRTDWDAGF
REGRQYGRGKSGGQVRDEYRTDYDEGRGGYGKIIVGKMKPRNDI
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcatgtttggtgagaagagaaagccaattggtgccatagcgctcggatcc
tatagggaccaacacttcaagggtagtcggttcgagcaggagcaggcgttattgaccagt
accaccttgtatatcggtaacctgtctttctacaccactgaagaacagatccacgaactc
ttcagtcgatgtggagacgtgaaacgaattgtgatgggtttggataaaggttcaaggacg
ccgtgtgggttttgctttgtcgaatactatgagcgtcctgatgctgagaatgcaatgaag
tatgtcaatggcacgagactggacgaccgcatcatccgtaccgactgggatgctggcttc
cgagaaggacggcagtatggccgaggaaagtccggcggtcaggtgcgagatgaatacagg
accgattacgatgaaggcagaggaggttacggtaaaatcattgttggcaaaatgaaaccc
agaaatgacatatag
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