Octopus bimaculoides (California two-spot octopus): 106871454
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Entry
106871454 CDS
T04127
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106871454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106871454
Spliceosome [BR:
obi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106871454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
106871454
NCBI-ProteinID:
XP_014773415
UniProt:
A0A0L8IE03
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Position
18:2017457..2034988
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AA seq
664 aa
AA seq
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MSLSRKELEDMKGIMDKTVQKFLGFSEPAVVTAALNCIDKGYDKRKTVDKLSTILDDQAP
RFTERLFEAWDDYKTNSKQLKTKKRKEVEKQENITETVIRKRRRFIDDENINIPGPGNPS
PGQLTADKVKEMMANAQRMIQERKAQLSIHTPSVPPGVVGSVDSISLSAQPSPSQTQQLM
NDAVEKAKRAAELQARIQAQLTGLSTGGTNITLPVTQKNIQASKPTPLILDEEGRTIDAK
TGQAIQLKHHTPTLKANIRAKRREQFKGLIEKPPEEISESRFFDGRLSSKAAQRPKRGFK
FHEQGKFEQLAQRLRTKAQLEKLQNEIAQAAKKTGIASAARLATIAPKKETREGDIPDVE
WWDEYILVNSSYDCITSTVDNLNESWKDEFDGITNLVEHPTMMKPPAEPEKEIAIPVYLT
KKERKKLRRQNQTETQKELQEKIRLGLVPPPEPKVRMANLMRVLGTEAVQDPTKVEAHVR
AQMVKRQKAHEEANAARKLTAEQRREKKIRKIKEDTSLGVHVSVFRIRDLSNPARKFKIE
TNVNQLFMTGIVVLYKDCNVVVVEGGPKQQRKFKRLILHRIKWAETQQHTKDEDDSDSEE
ESAKTNKCTLVWEGTTKTRGFGEMKFKACPTESFAREQFRKCGVEFYWDLAYSSNVFEAA
GEEL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtcacgcaaagaactggaagatatgaaggggattatggacaaaacagtccag
aagtttcttggcttcagtgaacctgcagttgtgacagcagcattgaactgcattgacaaa
ggttatgataaacgaaaaactgtagataaattatcaaccatccttgatgatcaggctcca
cgatttacagaaagactttttgaagcatgggatgactataaaaccaacagcaaacaacta
aagactaagaaacgcaaggaagttgaaaagcaagaaaacattacagaaacagtgattagg
aaacgcagacgttttatcgatgatgaaaacattaatattcctggaccaggaaatccaagc
ccaggacagcttactgcagataaggtcaaagaaatgatggccaacgcccaaagaatgatc
caagagcgcaaagcccagctcagtatacacactccaagtgtacccccaggggttgtgggt
agtgtggattctatttctttatctgcgcaaccatcaccatcacagactcaacagctgatg
aatgatgctgtggagaaagctaagcgtgctgctgaacttcaagcccggatacaagctcag
ttgacaggtctttctacaggaggaacgaatataacacttccagtcacacagaaaaatatc
caagcttccaaaccaacacccctaattcttgatgaagaaggtcgaacaattgatgcaaaa
acaggccaagccatccaactgaaacatcacacaccaactttaaaagccaacatccgagcc
aaacggcgagagcagtttaaaggtctgatagagaaaccccctgaagagatcagtgagagt
agattctttgatggacgactaagttctaaggcagcacaacgacccaaacgaggtttcaag
ttccacgagcagggaaaatttgagcagttggcacagagattacgtacaaaggcacagtta
gaaaaattacaaaatgaaattgctcaagcagctaagaaaaccgggattgcctctgctgct
cgattagccaccatagcaccaaagaaagagacgcgtgaaggtgacatccctgatgttgaa
tggtgggatgaatatattctcgtcaatagcagctatgattgtatcacatcgacagtggat
aatttaaacgaaagctggaaagatgaatttgatggaatcacaaatcttgtggagcatcca
accatgatgaaaccaccagctgaacctgaaaaagagatagccattcctgtttacctcaca
aagaaagaacgtaaaaaactacggcgccaaaaccaaacagaaacacagaaagaactacag
gaaaaaattcgattgggtcttgttccacctcctgaaccgaaagtacgtatggcaaatttg
atgcgggtgttaggaactgaagctgtccaagacccaaccaaagttgaagctcatgtccgt
gctcagatggtgaaacggcaaaaggctcatgaagaggcaaatgctgctcgtaaactaact
gctgaacagcggagagaaaagaaaatcagaaagatcaaagaagatacaagtttaggtgtt
catgtgtctgttttcagaatacgcgatctcagtaacccagctcgaaagttcaaaatcgag
acaaacgtcaatcagttattcatgactggtatcgtggttctgtacaaagattgcaacgtc
gtggttgtcgaaggaggtccaaaacaacagaggaaattcaaacgtttgatcctccatcgg
ataaaatgggccgaaacccagcagcacaccaaagacgaggatgatagtgattcagaggag
gaatctgccaagaccaacaaatgtacattggtgtgggaggggacaacgaagacacgtggc
tttggtgaaatgaagttcaaggcgtgcccaacagaaagttttgctcgggaacagttccgc
aaatgtggcgtggaattttactgggacttggcttatagcagcaatgtatttgaagctgcc
ggtgaagaattatga
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