KEGG   Octopus bimaculoides (California two-spot octopus): 106871620
Entry
106871620         CDS       T04127                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03020  RNA polymerase
obi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106871620
  09124 Replication and repair
   03420 Nucleotide excision repair
    106871620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obi03021]
    106871620
   03019 Messenger RNA biogenesis [BR:obi03019]
    106871620
   03400 DNA repair and recombination proteins [BR:obi03400]
    106871620
Transcription machinery [BR:obi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106871620
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106871620
DNA repair and recombination proteins [BR:obi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106871620
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 106871620
NCBI-ProteinID: XP_014773674
UniProt: A0A0L8HC86
LinkDB
Position
1:complement(192389188..192391734)
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVRKKLFTEVEGTCTGKYGFVIAVTSIDNIGAGLIQ
PSRGFVVYPVKYKAIVFRPFKGEVFDAVVTQVNKVGLFTDIGPLSCFISRHSIPADMEFD
PNSNPHCYKTKDEDVVIQQEDEIRIKIVGTRVDAKDIFAIGTLMDDFLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccatgtgtcattagaacacgaaattctacttcatcctcgatactttggcccc
aatctactaaacattgtacgaaagaaattatttacagaagtggaaggaacctgtacaggg
aaatatggatttgttattgctgtcacatcgatcgataacattggtgcaggactgattcaa
cccagtagaggttttgttgtttatcctgttaaatacaaagcgatcgtcttcagaccattt
aaaggagaggtgtttgatgcagttgtaacccaagtgaacaaagttggcttatttactgat
attggacctttgtcatgttttatctcccgacattctattcctgctgatatggaatttgat
cctaattcaaatccgcactgttataaaaccaaagatgaagatgttgttatccaacaggaa
gatgaaatacgtatcaaaattgttggtaccagagtagatgcaaaagatatttttgctatt
ggaacacttatggacgatttccttggtttagttagttaa

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