Octopus bimaculoides (California two-spot octopus): 106871656
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Entry
106871656 CDS
T04127
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106871656
09123 Folding, sorting and degradation
03018 RNA degradation
106871656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106871656
03041 Spliceosome [BR:
obi03041
]
106871656
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106871656
mRNA cycle factors
Stress granule specific factors
106871656
Spliceosome [BR:
obi03041
]
Complex C
Other components
Complex C specific factors
106871656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_Nup35
RRM_5
RBD_DEAH11
RRM_7
RRM_3
RRM_8
MHC_I
Motif
Other DBs
NCBI-GeneID:
106871656
NCBI-ProteinID:
XP_014773726
UniProt:
A0A0L8HC44
LinkDB
All DBs
Position
11:71740138..71741823
Genome browser
AA seq
399 aa
AA seq
DB search
MNPAAAILHMASLYVGDLHQDVTEKMLFEKFSICGTVISIRVCRDMVKRRSLGYAYVNFQ
QPTNAKKAIEMLNFEPIMGRPIRIMWWQRDPSLRKSGVGNIFIKNLDKSIDNRALYDTFS
LFGNILSSKIVSDENGSKGYGFVHFESEDAAACCVQKTNGMLLNGKKVFVGKFIPRRERM
HQLAEKGFTNVYVKNFGDSFNDESLRKLFEKYGNVISAKVMTDSSGKSKGFGFVNFNNQE
DAKKATSEINGMEINGKQLYAGRAQSKTERQAILKENFQTLSNRGNRNRMGHYQGLNLYI
KNLDDSIDDERLRYHFSKYGAITSAKVMMINGRSKGFGFVCFSAPEEATEAALNMNGRII
DTKPLYVALAQRKEERRAQLSSQFFQRYANGLSQNYWAY
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgcggcagctattctccacatggcttccttgtatgtcggagatcttcatcaa
gatgtcaccgaaaaaatgctgttcgagaaattttctatttgtgggacagttatttcaata
agggtttgcagagatatggtgaaaaggagatcgctgggatacgcctatgtcaatttccag
caaccaacaaatgccaagaaagctattgaaatgctaaactttgaaccaataatgggacga
cccataagaattatgtggtggcagagagatccctctcttcgtaagtctggggtgggaaac
atctttattaagaacctggataaaagtattgataaccgagctttgtatgacaccttttcc
ttgtttggtaatattttatccagtaaaattgtatcggatgaaaacggttcaaagggatac
gggtttgtgcattttgagagtgaagatgctgctgcctgttgtgttcagaaaacgaatgga
atgttacttaacggcaagaaagtgtttgtaggaaaatttattccacgcagggagaggatg
caccaactggccgaaaaaggatttactaatgtgtatgttaaaaactttggcgatagcttc
aacgacgagtctctccgtaaactattcgaaaagtacggcaacgtcatcagcgctaaagtt
atgacagatagctccggtaagtcaaaaggattcggttttgttaacttcaacaaccaagag
gatgctaagaaagctaccagtgaaatcaatgggatggagattaacggaaagcagttatat
gctggtagggctcagagcaagactgaaagacaagctattttgaaagaaaatttccagacg
ctaagcaatcgaggaaacaggaacaggatgggccactaccaaggtctcaatctatacatt
aaaaatcttgatgattccatcgatgatgaacgacttcgttaccatttctctaaatacggt
gccattacaagcgcaaaagttatgatgataaacggccgttctaagggatttggatttgtc
tgtttttccgcgccagaagaagcgaccgaggctgctctgaatatgaatggcagaataatt
gataccaaaccattgtatgtagctttggcccaacgcaaggaagagcgcagggcccagctg
tcttcgcagttctttcagagatatgccaatggattaagtcaaaattattgggcatattaa
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