Octopus bimaculoides (California two-spot octopus): 106871826
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Entry
106871826 CDS
T04127
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106871826
Membrane trafficking [BR:
obi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106871826
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
106871826
NCBI-ProteinID:
XP_014774011
UniProt:
A0A0L8HAT1
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All DBs
Position
4:52888384..52968833
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AA seq
1395 aa
AA seq
DB search
MSWWDSQNFSDFASNALRNAQKKIDKVLDIQDENTKQKDLRSSKKEIEDSSWSTWLPFDH
EKLTSPRSSWSLPFGLKSEPENDSFFTQQPSTPVTQQAPKQTNLPPIYPSRNNSAKDLLN
QTEETSEKIKGETSQCTTLEPETESHKDKTEAVQATLDPSRKNKTKKNEKHSLFDPVENK
SDSPKEDSFIDISSIESNISFESEKSNFVEHESITESNSTMGKAVPDFEEISSSNTVSST
EILKSSTEANISFEELESEVKIDNERESTPAYESSLLAVCVNTDSDNGESPLQMKGSDFE
PAESRDNNKPSHQSFNSDQENVGLSDLDLQNYKPVEIGKQTLESANDSLQEDENAEISIV
NEDLKTVSGTDALPCDNSNLMDVTCESLNSFHTVIRSQTTSNKTDKSDVVEVVESCDITE
FTQSASQAQVEPSSSLVSESVEDHYDKTLSSEGKLLKDNKKIFKGVCETPINNKQQELEE
YSPLSPIVEVIEESSNKVDCYESKIDSSANTSSCSSETVIEKVSTLIETEGKQELEAAST
ESIMSSSSNSSYVKCLIEEAMEEARSEHSDSHSNSADRSESSKTESEHNSEKSVSGHDSG
DEIDTTTSSDIEIISTPTPNGERSERLFDLSPLRITLHKSLPQRSPVHAHQRSDSQSSSS
TYSKCGESDQLSPGRDSLERQDLESGDESKEGATPSVKEEPNNDKDSPDVPLDVKDACHP
DKLLKAELNPRQTVEFCKKLAELSEVLQHRENKLVQMSRENNDLLETNSILRNQLQQSEE
IRETEQADIHILTEEFTERLAESEKKIQTVLREKESLKKQLQKTIEENTQNKSLDSSYKE
ILDEKDNQIAELLHEGEKLSKQQLQSNNIIKKLRTKEKENDSLIASQKKKLEELKTESDD
LKAVLDSNEDTGKKQSETISKLNTALVKQEKEVTKLKNDLDESQEKVRGLQVALDNSYKE
IAELNKTNAARDSKVQEAVLSAELQVREEFNYSMEKDRQKARLEKESFICQIEDLQINLS
RQEKEHTRREDLLKREISDLQQRLQEDEARNQDLTISVTSATRPLLRQIENLQSTYGAQS
LLWEKREKALTERISEIQQQLAVAEEKENISSEKILTLSSKIKALETQNTSMRQEKCQLS
AQLEMEKSKREMLEDSQNNATCQLAALRQQMSNEVMELKKDKVYLEAQLEIEKTKVDNEK
KKLIQSLEQLKEMEKNFYSRGSPSPISSNRTSPNNPIEATSMSMTNSLSASGLSQDDLDK
SLLFVSTSASGSKSSLYEHLRQGGGGAANLLENLQSQLKQKEGEITQLQDDISQLERTRE
SMARELVNLSNLNDNLQEQVTELPEIKEKHSELYQRYNALLQMYGEKVEEAEELRMDLQD
IKKMYKDQIDHLLAK
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtgggattcacaaaatttttctgactttgcttctaatgccttgagaaatgca
cagaagaaaattgataaagtacttgatattcaagatgaaaatactaaacaaaaagatctt
agatcttcaaaaaaggaaattgaagactccagctggtcaacttggcttccttttgatcat
gaaaaactaacatcacctcgtagttcctggtctttgccatttggtttaaaaagcgaacca
gaaaatgatagctttttcactcagcaaccaagtacacctgtcacacagcaagctccaaaa
cagaccaacttaccacccatatatccttcaaggaataattctgcaaaagacttattaaat
cagacagaagagacaagtgagaaaataaaaggtgaaacttctcagtgtactaccttggaa
cctgaaaccgagagccataaggataaaactgaagctgtccaagcaactttggatccttca
agaaaaaataaaactaagaaaaatgaaaaacactcattatttgatccagtagaaaataaa
tcagattctccaaaagaggattcttttatagatatttcttcaattgaatccaatatttca
tttgaaagtgaaaaatctaattttgtagaacatgaatctataacagaaagtaattctacc
atgggtaaggcagtccctgattttgaagaaatttcatcttcaaatacagtctcatcaaca
gagattttaaagagttctacagaagcaaatatttcatttgaagaactagaatcagaggtg
aaaattgataatgagagagaaagtacacctgcttatgagagttctcttttagcagtgtgt
gtaaacactgattctgataatggtgagagcccactacagatgaaaggttctgattttgag
cctgcagagtcaagagacaataacaaaccttctcatcaaagttttaactctgatcaggag
aatgtagggctctcagatttagatttacaaaattataagcctgtagaaattggaaaacaa
acactggagtctgcaaatgattctcttcaagaagatgaaaatgctgaaattagtatagta
aatgaggacctcaaaactgttagtggtactgatgctcttccctgtgataactcaaatttg
atggatgttacttgtgaatctttaaatagtttccatactgttattagatcacaaacaacc
agtaataaaactgataaatctgatgtagtggaagttgttgaaagctgtgatataactgaa
tttactcagtctgcatctcaggctcaagtggagccttcgtcttcattggtttctgaatca
gttgaagatcattacgacaaaactctttcatcagaaggaaagttactaaaagataataaa
aagatttttaaaggtgtatgtgaaacccctataaataacaaacaacaggaacttgaagaa
tatagtccattaagtccaattgtagaggtaattgaagaaagttcaaacaaagtagattgt
tatgaaagtaaaattgacagtagtgctaatacaagcagttgttcatcagagactgttata
gagaaggtgtctacactaattgaaactgaaggaaaacaagaattagaagctgctagtaca
gaaagtatcatgtcttcctcttccaatagttcctatgtaaaatgtcttatagaagaagct
atggaagaggctcgttctgaacacagtgatagccattcaaattcagctgaccgatcagag
agttccaaaacagagtctgagcataatagtgaaaagagtgtcagtggtcatgattctggt
gatgaaatagacacaacaacatcatcagatattgaaataatatctactccaaccccaaat
ggagaacgcagtgagcgtttgtttgatttatctccattacgaataacattgcacaaaagc
ttaccacagcgtagccctgttcatgcccaccaacgatcagatagccagtcaagctctagt
acatacagcaaatgtggagaatccgatcagttaagtcctggacgtgatagcttagaacga
caagatctagaatctggagacgagagtaaagaaggtgctactccttcagttaaagaagaa
ccaaataatgataaagattcacctgatgttccattggatgttaaagatgcttgtcatccg
gataaattgcttaaagcggaattgaaccctagacaaacagtggaattctgtaagaaactg
gctgaattatctgaagtccttcaacatcgagagaataagcttgttcagatgagccgagaa
aataacgatcttttagaaacaaacagcatacttcggaaccaattacagcagtctgaagag
attcgggaaacagaacaagctgacatccatattctcacagaagagtttacagaacggtta
gcagaatcagaaaagaaaatacagactgtactcagagagaaagagagtttgaagaaacag
ctacagaaaactattgaggaaaacactcaaaacaaatcattggactcctcatataaagaa
attctggatgaaaaagacaaccaaatagctgaacttttgcacgaaggtgagaaattgtcg
aaacaacaacttcagagtaataacattattaaaaaattacgaacaaaagaaaaagaaaat
gattctctcattgcttcacaaaagaaaaagcttgaagaattaaaaactgaatcagatgat
ttaaaggcagttttggattctaatgaagacactggaaagaaacagtcggaaactatttct
aaactgaatactgcattagtgaagcaagagaaagaagtaacaaaattaaagaatgacttg
gatgagagccaagagaaagttcgaggcttacaggttgctttagacaactcatataaggaa
attgctgaactcaacaaaaccaatgctgctcgtgacagcaaagtccaggaagctgtactc
agtgcagaacttcaagtccgagaagagttcaattactccatggaaaaagatcgtcaaaag
gctagacttgaaaaagagtcttttatatgtcaaattgaagatttgcaaattaacctcagc
cggcaagaaaaagaacacaccagacgtgaggatttgttgaaacgagaaatttctgacttg
cagcagagattgcaagaagatgaggcccgaaatcaagatttaacaatctctgtaacctct
gctactcgtcctctgttacggcagatagaaaatctacagtccacatatggtgcccagtca
ttgctgtgggagaaaagagaaaaagctcttacagaaagaatctcggaaatccagcagcag
ttagctgtggctgaagaaaaggaaaatattagcagtgagaaaatcctaacattatcttca
aaaattaaagcattagaaacacaaaataccagtatgagacaagaaaaatgtcaactttca
gcacaattagaaatggaaaaatctaaaagagaaatgctggaagatagccagaacaatgcc
acgtgtcagttggctgctttacgccaacaaatgtccaatgaggtgatggaattaaaaaaa
gataaggtttatcttgaagctcagctggaaattgaaaaaaccaaagttgataacgagaag
aaaaaacttatccagtcccttgaacaattaaaagaaatggagaaaaacttctacagtcgg
ggaagcccttcacctatatcatccaatcgaactagtcctaataaccctatagaagccaca
tcaatgtcaatgaccaattcgttatcggccagtggcctatcacaggatgatctagacaaa
agcttattgtttgtaagcacatcagctagtggaagtaaatctagcctctatgaacattta
cgtcaaggaggaggtggagctgctaatttacttgagaatttacagtcgcaactgaaacag
aaagaaggagaaataactcagctacaagatgatattagtcaacttgaaaggaccagagaa
tctatggctagagaattggttaatctttcaaacttaaatgataatcttcaagaacaggta
acagaacttccagagatcaaagaaaagcattctgaattgtatcagcgatataacgctctt
ttacaaatgtatggtgaaaaagttgaagaagctgaagaactgcgcatggatttgcaagat
attaaaaagatgtacaaggaccaaattgatcatcttctggctaaatga
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