Octopus bimaculoides (California two-spot octopus): 106871854
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Entry
106871854 CDS
T04127
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03030
DNA replication
obi03410
Base excision repair
obi03420
Nucleotide excision repair
obi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106871854
03410 Base excision repair
106871854
03420 Nucleotide excision repair
106871854
03430 Mismatch repair
106871854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106871854
03036 Chromosome and associated proteins [BR:
obi03036
]
106871854
03400 DNA repair and recombination proteins [BR:
obi03400
]
106871854
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106871854
DNA Replication Termination Factors
ELG1-RFC complex
106871854
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106871854
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106871854
Check point factors
HRAD17(Rad24)-RFC complex
106871854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_lid_RFC1
AAA_22
RuvB_N
AAA_14
AAA_assoc_2
AAA_24
ResIII
DUF815
DEAD
AAA_16
AAA_30
AAA_5
AAA_7
PhoH
nSTAND_NTPase5
AAA_19
ATPase_2
bpMoxR
Mg_chelatase
nSTAND3
TIP49
AAA_28
DNAX_ATPase_lid
PML_C
AAA_2
Gp44_lid
AAA_3
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
106871854
NCBI-ProteinID:
XP_014774067
LinkDB
All DBs
Position
26:24952975..24960149
Genome browser
AA seq
309 aa
AA seq
DB search
MDGGNKEKSNLPWIEKYRPQNLEELISHNDIINTIKKFVNEDRLPHLLFYGPPGTGKTST
ILAVAKQIYSPKEFNSMVLELNASDDRGIGIVRENILSFASTRTIFKSGFKLVILDEADA
MTRDAQNALRRVIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFAPLSTDQMMPRLEYV
IKQEGVNVTQDGMKAIVTLACGDMRRSLNMLQSASMAFDKVTEDNVYLCVGHPLRKDIEN
IVQWLLNSSFTEAYKNILQLKVAKGLALQDILTEVHVYVHRSKNYFIFFHYYYYLIFSSF
LSLNFFFFN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggcaacaaggaaaaatcaaaccttccatggattgaaaaataccgcccccaa
aaccttgaggaattgatttctcataatgacattattaatacaatcaagaaatttgtcaat
gaagatcgtctacctcatttacttttttatggtcctcctggtacaggaaaaaccagcact
atccttgcagttgccaaacagatttattcccctaaggagttcaattcaatggtccttgag
ttgaatgcctctgatgaccgtggtatcggaattgtgcgagaaaatattctaagttttgcc
agtacaagaacaattttcaagtcaggctttaagttggtcattttagatgaagcagatgcc
atgacacgagatgctcagaacgcacttagaagagttatcgagaaattcacagagaacacc
agattttgcatcatatgtaactacctatccaagattattccagcattgcagtcacgttgc
acacgctttcggtttgctcctctttccacagaccaaatgatgccacgtttagaatacgtc
attaaacaagaaggggtgaatgtgacccaggatggcatgaaagctattgttactttggca
tgtggtgatatgaggcgttctctcaatatgcttcagagtgcttcaatggcttttgataaa
gtgacagaagataacgtttatttatgtgttggacatcctctccgtaaagacattgaaaat
attgtccagtggctgttaaactccagtttcacagaagcttataaaaatattctccagttg
aaggttgccaaaggtttggctctccaagacattctcaccgaagttcacgtttacgtacat
cgaagtaagaattatttcattttctttcattattattattatttgatattttcctcattt
ttgtcattgaattttttttttttcaattaa
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