Octopus bimaculoides (California two-spot octopus): 106871905
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Entry
106871905 CDS
T04127
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03440
Homologous recombination
obi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106871905
03460 Fanconi anemia pathway
106871905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106871905
03400 DNA repair and recombination proteins [BR:
obi03400
]
106871905
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106871905
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Topoisomerases
106871905
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106871905
FA (Fanconi anemia) pathway
106871905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
106871905
NCBI-ProteinID:
XP_014774146
UniProt:
A0A0L8HA35
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Position
2:121998046..122035609
Genome browser
AA seq
857 aa
AA seq
DB search
MKTVFMVAEKPSLAASLAKILSNNSMTSRKGYNGACSVHEYRGKFQGEPAYFKFTSVCGH
VMTLDFTGKYNNWDKVDPVELFIAPTVKKEASPNLHMPDFLKKEGKGSDYLVLWLDCDKE
GENICFEVIDAVLPVMKRNSDKNIYRAHFSAITESDVKRAMNNLGTPNENEAMSVDARQE
LDLRVGCAFTRFQTKFFQGKYGNLDSTLVSYGPCQSPTLGFCVERHDKIQSFKPETYWII
NVQVAHPDGKNVHVDWERYRVFDKEVVQMFLSMIKSADSARVYDVIKKEKTKSHPQALNT
VEMLRIASSALGMSPHHTMQIAERLYTQGYISYPRTETTHYPANFDLVGTLRQQTNSSQW
GSYVKDLLKQGIQKPRKGHDAGDHPPITPMKGASESELGHDAWKLYEYIAQHFIATVSPD
CRYMQTTIYFEIGQEKFTCTGNILSDPGYTAIMTWQAITDDEELPPFVKGENYNVSEVRL
AERQTGPPDYLTESELITLMEKHGIGTDASIPVHINNICERNYVQIISGRKLKPTTLGIV
LVHGYQKIDADLVLPTMRSAVEQQLNLIALGKACFNVVLEHALEIFRLKFKYFVNNISGM
DELFEVSFSPLASSGKPMSRCGKCRRYMKLIQAKPSRLHCSNCDDTYSLPQNGGIKLYQE
LKCPLDDYELVLWTTGTKGKSYPLCPYCYNNPPFKDMRKGSGCNECTHPTCQHAFSQNGV
SECLECSQGILVLDQSSAPKWRMACNKCSLVINLLEGAHKVTLKDDDCEECGASIINVDY
GKNKSPLPDNATDYTGCVFCDSTFKPLVEMHHAMAPRVRRTATRGGGAGRGKGRGRGRGK
GKHKPKDKMAQLAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtatttatggtggctgaaaagccatctttggctgcttcgttagccaaaatc
ttatccaacaacagcatgacatctcgaaaaggttataatggagcctgttcagtgcatgaa
tatcgaggtaaatttcaaggcgaaccggcttacttcaaatttacatcagtgtgtggtcat
gtcatgaccctggattttactggcaagtacaacaattgggataaagtcgatccggtggaa
ttatttattgcccctactgtgaaaaaagaagcttcaccaaatcttcatatgccagacttt
ttaaagaaagagggcaaaggttctgattacttagtattatggctagattgtgataaagaa
ggtgagaatatctgctttgaagtcattgatgctgttcttcctgttatgaagaggaattct
gacaagaacatataccgtgctcactttagtgctatcacagaatcagatgtgaagcgagct
atgaataacttgggcacacctaatgagaatgaagcaatgtcagttgatgccagacaagag
ttagatctgcgagttggttgtgccttcactcgattccaaaccaaattctttcagggcaag
tatggcaatttggatagcactttagtgtcatatggtccttgtcaatcacctacattgggc
ttctgtgtggagcggcatgataaaatccaatcatttaaacctgaaacctattggatcatt
aatgtacaggtggctcatcctgatggcaaaaatgtccatgttgactgggaacgatatcgt
gtgtttgataaagaagttgtacagatgttcctttccatgatcaaatctgctgattcagcc
agagtgtatgatgtgattaagaaagagaagaccaaatctcatccccaggctttaaacaca
gttgaaatgcttcggattgcaagttctgcgttgggtatgagtccccaccataccatgcaa
attgctgaacgattgtatacccaaggctatatcagttacccaagaacagaaacgacacac
tatcccgcaaactttgacctcgttggtaccttacggcagcaaaccaacagctcccagtgg
ggttcttatgttaaagaccttttaaagcaaggaattcagaaaccaaggaaaggtcatgat
gctggtgatcatccccctattactccaatgaaaggggccagtgagagtgaacttggtcat
gatgcctggaaactgtatgaatatattgcacaacattttattgctactgtctctcctgat
tgtcgttacatgcaaacaaccatttattttgagattggccaagagaagtttacctgtaca
ggtaatatactcagtgatcctggctacactgcaattatgacatggcaagctattacagat
gacgaggaactgccaccttttgtcaaaggagaaaattacaatgtttcagaagtccgactt
gctgaacgtcagactgggcctcctgattatctgacagaaagcgagttgattacattgatg
gagaaacatggtattggtactgatgcaagtattcctgttcacatcaataacatatgtgag
cggaattacgttcaaattatatcgggtcgtaaactaaaaccaactacattgggtatcgtt
ttggtgcatggctatcaaaagattgatgctgatttggttttaccaactatgagatctgct
gtagaacaacagctcaacttgatagcgcttggcaaggcatgttttaatgttgtgctggaa
cacgctttggaaatctttcgcctgaagttcaagtactttgtcaacaatatctctggcatg
gatgaattatttgaagtctctttttctcctttggcctcatcagggaaaccaatgtctagg
tgtggcaaatgtcgtcggtacatgaaactgattcaggcaaaaccaagcaggttacattgt
tcaaattgtgatgatacatactctttgccgcaaaatggtggaattaaactctatcaggag
ttaaaatgtcctctagatgactacgaacttgtactttggacaactggtacaaagggaaag
agttatcccttatgtccatattgctataacaatccacctttcaaagatatgcgcaaaggc
agtggctgtaatgaatgcacacatcctacatgtcaacatgcattttctcaaaatggcgta
tctgaatgtcttgaatgcagtcaaggtatcttggtattggaccaatcttcggcaccaaaa
tggcgtatggcatgtaacaagtgttcccttgtcatcaacctgttagaaggagcacataaa
gtcactttaaaggatgatgattgtgaagagtgtggtgcctctattataaatgttgactat
ggcaagaacaaatctccactaccagacaatgctactgattacacaggttgtgtattttgt
gacagcactttcaagcccctggttgaaatgcaccatgctatggcacccagagtgcgacgt
acagcaacacgtggcggaggagctggccgtggaaaagggcgtggccgagggcgtggtaaa
ggcaaacataaacccaaagacaaaatggcacagttagctgcatattttgtatga
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