Octopus bimaculoides (California two-spot octopus): 106872131
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Entry
106872131 CDS
T04127
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106872131
03015 mRNA surveillance pathway
106872131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106872131
03041 Spliceosome [BR:
obi03041
]
106872131
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106872131
Spliceosome [BR:
obi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
106872131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
106872131
NCBI-ProteinID:
XP_014774486
UniProt:
A0A0L8H8Y4
LinkDB
All DBs
Position
2:complement(150457154..150488834)
Genome browser
AA seq
1040 aa
AA seq
DB search
MTDAGFFKGTTAEQDNRFADKKKKLLKSMKFADGLEKKVDMNKVNVETLKPWISQRITEL
LGIEDDVIVEFVYNQLEDKQQPDPKDIQINLTGFLNPKNARIFMQELWDLLISAQDNVSG
IPTKFLEQKKEEIKKRQAEQERIQAGLRKQEEHMKDINKDRHDGDRRDHRSQDRSRSSSR
SRSSKDSSQSRSPQRPSIDSKSPKLISASSPGSKEEPRPLEPKLDIIDINEDAEKENIKN
FDNKKKSEEKVTVKKEVTKKDRKSRSSSPERREKSHSKSPKYRRRSRSQSRSPSRHRSPK
SHKYNSPHKSPQRRTISPEKKRSPPYWKRSISPRKKHSSPPRKRRSPSPRKPRSSPRKRR
SPSPRKRRSPSPRRRHSPSPWRRRSPSPRKKRTISPRPISSFRRRISPNQRKWIGSASPN
PNNRRSPPGRRPIRRRSPSSSSVSSSSSESSSSSSSAGKSKRTTENSRRDNKQGHNHESA
KAASPVKLGIQQRRHYRTHEDTVESSTSSSSEDEEPPHKESRDRRDKRSESPIRNRRYPS
PSRPRDRYGRRDLIRDPGSRRIRRRPSPYSMRRSPYPYAPRGWSPQQRYRRSPPRYASPR
LKRSPPHSPMRARDRPRSNRPRDISRSPSPRRRNIPSPNQMRRRHRKVTPDSPPRQMRQH
SPYARSPPRMKRSPSHSPPPPVRQRRNISKSRTPSPPRKVIHGDHSSSESPQRVVVKKVL
PGAKRDRSESESPVCRDASPQMSVMTRRQIPATQHQSYLKQKSSSMSGSASPSPERFRQS
PSPLRQRTSKTVTVHQHSENLSPVASHQRKVQGVSASPEKVNTSLKLPKKRSLSRSMSMS
RSPSPVLSRRKKSSSPPAKKARDDVESSKLRDSPKKTKNLPKDQQRLSSQDSYKSRPLSS
NLLVPEPVSVDSNHPSLEKVYQDDTMFQDSSESPKKKLKTDSSEKKKKKKKSSSSEGSDS
DAATKKKKKKKKKKKHKKHKKHKHKKGKEEEEAGSDSAAEQEKLEQLLREKALQSLNKAK
TNPATSGNESSSGTFHIPTE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgcagggttctttaagggaaccactgcagagcaggacaatcggtttgcagat
aaaaagaaaaaactattgaaatcaatgaagttcgcagatggattggagaaaaaggttgat
atgaataaagtgaatgtagaaactctaaaaccatggatttcccagagaatcactgaactt
ttagggattgaggatgatgttattgttgaatttgtatataatcaacttgaggacaaacaa
cagccagatccaaaggatattcaaattaatcttactggatttctgaaccccaaaaacgcc
cggatttttatgcaagaattgtgggatctgttaataagtgcgcaggataatgttagtgga
attccaacaaaattccttgaacaaaaaaaggaagaaataaagaaacgtcaggctgaacag
gaacggattcaagctggtttaagaaagcaagaagaacatatgaaagacattaataaagac
cgtcacgatggtgacagaagagatcacaggtctcaagatagatcaagaagctcatccagg
agtaggtcatcaaaagatagcagtcagtctagatctccacaacgaccttcaattgattca
aaatcaccaaagttgatttcagctagttcccctggcagtaaagaggaacccaggcctttg
gagccaaagctggacataattgatatcaatgaagatgctgagaaagaaaatataaagaat
tttgacaacaaaaaaaaaagcgaggagaaagttactgtaaagaaagaggtgaccaagaaa
gatagaaaatctagatcttcatctcctgaaagacgagaaaaaagtcattctaagagtccg
aaatatcgacgtcgatcacgttctcaaagcagatctccttcacggcatagatcaccgaaa
tcccataagtataactcacctcataaatctccccagagacgcactatttctcctgagaaa
aagagaagtccaccttactggaagaggtcaatatcaccaaggaaaaagcacagttctcct
cctcgtaaaaggaggagcccgtctccaagaaaacctcgtagctcacctaggaaaaggagg
agtccatcaccacgaaagcggaggagtccttcaccaaggagacgacatagtccatctcca
tggaggcgacgtagtccctctcctcgtaagaaaagaactatttcacctaggcctatcagc
tctttcagaagaagaataagcccaaatcagagaaaatggattggatcagcttcacctaat
ccaaataatagacgttctccaccagggcgccgtcctataagaaggaggtctccaagctcc
agttctgtttccagtagttcatctgagtcttcatcaagttcaagttcagctggtaaatca
aagcgcactactgaaaattccagaagggataataagcaaggtcataatcatgaatctgca
aaggctgcttctcctgtaaaattaggtattcaacagcgacgccattataggactcatgaa
gacactgttgaaagttcaacctcttcttcttctgaagatgaagaaccacctcacaaagaa
tctcgagacagaagagataagagatcagaatcaccaatacgaaatcgtcgttatccatca
ccttctcgacccagagacagatatggtaggagagaccttatccgtgatcctggttcccga
cgaattaggaggaggccttctccatattctatgcgccggtcaccctatccatatgcacct
agaggctggtctcctcaacaaagatatcgcaggtcacctcctcgctatgcatctcctaga
cttaaaaggagtccacctcactctccaatgcgtgctagagatcgacctcgctctaatcgt
cctcgagatatttctagatctccatcgccaagacgccgaaacattccttcacctaaccag
atgcggcgaagacatcgaaaggttacaccagattcccctcctcgtcagatgaggcaacat
tcaccatatgctaggtcccctcccaggatgaaaagatcaccatcacattcaccaccgcca
ccagtacgtcagagaagaaacatctcgaaatctcgcactccttctcctcctcgtaaagta
attcatggtgaccactcgtcatcagaatcaccacagagagtagtagtgaaaaaggtcttg
ccaggagctaagagagatcgtagtgaatcggaatctcccgtttgccgtgatgcttcacct
caaatgtctgtaatgacaaggcgacagattccagcaacacaacatcaatcttacctgaaa
caaaaatcttcttcaatgtcgggttctgcatctccatcacctgaacgtttccgacaatca
ccatcacctcttcgtcaaagaacaagtaaaactgtaacagtacatcaacactcagagaat
ctatctcctgtggcatcacaccaaagaaaagttcagggtgtatcagcatctccagaaaaa
gtgaacacttcattgaaactccccaagaaacggtcattatctcggagtatgtcaatgagt
cgtagcccctctccagttctgtccagaaggaaaaaatcatcatcacctccagctaaaaaa
gctcgggacgatgttgaatcaagcaagttaagagattcccctaaaaaaactaaaaattta
cctaaagatcaacaaaggttaagtagtcaagattcgtataagtcaagaccactttcttca
aacttattagttccagaacctgtttctgttgactcaaaccatccttctcttgaaaaggtg
tatcaggatgacacaatgttccaagattcttctgaatctccaaagaaaaagctaaaaaca
gattcatcagagaaaaagaaaaagaagaagaagtcttcctcgtctgagggatccgacagt
gatgctgcaacaaagaaaaagaaaaagaagaagaagaagaaaaagcacaagaaacataag
aagcataagcacaagaagggcaaagaggaagaagaggctggttctgatagtgctgcagag
caagaaaaactggaacagttattgagagaaaaagcattacagtctctgaacaaggccaaa
accaatcctgccacatcaggcaatgaatccagttctggaacatttcatattccaacagaa
tag
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