Octopus bimaculoides (California two-spot octopus): 106872492
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Entry
106872492 CDS
T04127
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi00450
Selenocompound metabolism
obi00970
Aminoacyl-tRNA biosynthesis
obi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
106872492
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106872492
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obi01007
]
106872492
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obi03016
]
106872492
Enzymes [BR:
obi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
106872492
Amino acid related enzymes [BR:
obi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106872492
Transfer RNA biogenesis [BR:
obi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106872492
Prokaryotic type
Other AARSs
106872492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
WHEP-TRS
GST_N_5
tRNA-synt_1
GST_C_2
Anticodon_1
GST_C_3
tRNA-synt_1e
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
106872492
NCBI-ProteinID:
XP_014774996
UniProt:
A0A0L8H6U4
LinkDB
All DBs
Position
17:complement(6527827..6568651)
Genome browser
AA seq
941 aa
AA seq
DB search
MALPTLHTDVANNPETLKLFIAVNLSNRNINVVHRKKDERIVPYLSKTQLPVLELAKDDF
LFSTNSATRYLLSGDVVMNDANIDTQVDMWLQWEACQLQSTVKDIISIASGKNVSKEDNG
ANLALLHSHLKYMEDKLKKNDNNLVKGQMTAADVTVWSTLYHVFNQTDVIKDWEKDYPKV
SSWFKCLSGKKDFQDGVNQLTDSQRTAALTESVCKSNQKSSKATWESKSGSKLQDDQKPK
SLTSKLPVKPVKQPENQEAANDVLVNSNEISKSVAAWKLPCTTNATKREHPILPVPGARN
ILITSALPYVNNVPHLGNIIGSTLSADIFSRYSQLRGYNCLYICGTDEYGTATETKAMEE
GLTPQQICDKYNVIHEEIYKWFNISFDYFGRTTTKLQTEIAQDIFWKLHKKGYISEDTVD
QLKCEKCDRFLADRFVEGICPLCGFDDARGDQCDKCGKLINAIDLVKPRCKTCSNTPIVK
SSRHLFLDLPKLEPDLKKHLDHVFPKGIWTNNAKVITNSWLRDGLKPRCISRDLKWGTPV
PLKGFTDKVFYVWFDAPIGYISITANYTEKWEQWWKNSSQVQMYNFLGKDNVPFHSVIFP
ATLLGADPNYTLVDSVIATEYLNYEDGKFSKSRGVGVFGNNAKDTGIPADIFRFYLVYMR
PESQDTAFSWDDFQLKNNCELLNNIGNFINRALMFVSNSFQQTIQAMDLTEGDEKLIAQI
NKLLHRYIENMECTKMRDSLRILLEMSTLGNQYMQMHKPWVLVKGTNEEKQRAGTIVSLS
SNIAALLSVLLQPFMPQTSATIQLQMQFPPEKNVILNNFSCYLSAGHKIGKPKPLFQKLE
YDFIQELKKKFSSTLTTAASNKTNQTAAAATLGSEADVESLNQLVTEQGLKVRELKANKA
EKSVIDGEVAELLELKRQLALKQGVDPASLGVGNKKKNKKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccgactctccacacggacgtcgccaataatccagaaactctaaaattattt
attgctgtaaacttatccaacagaaatattaatgttgttcataggaagaaagatgaaaga
attgttccctatttgtcaaaaacgcaactgccagtcttggaattggctaaagatgatttc
ttgttttcaacaaactcagccaccagatatctgctcagcggagatgttgttatgaatgat
gctaatattgatacccaggtagatatgtggcttcaatgggaagcatgtcaattacagtct
actgtaaaggatataatatcaattgcgagtgggaagaatgtttctaaagaagacaatggt
gcaaatttggctttgcttcactctcacctgaagtatatggaggataaactgaagaaaaac
gataacaaccttgtgaaaggccaaatgactgctgctgatgtcacagtttggtcaacattg
tatcatgtattcaatcaaacagatgtcattaaagactgggaaaaagattatcctaaagtg
tcgtcctggtttaaatgtttgtctggcaagaaagatttccaagatggagtcaatcagctg
accgatagtcaaagaactgcagctctaacggaatctgtttgtaaaagtaatcagaaatcc
tcaaaagctacatgggaaagtaagagtggatcaaagcttcaagacgaccaaaaacctaaa
tctctgacatccaagttaccagtgaagcctgtaaaacaacctgaaaaccaggaagcagcc
aatgatgtattagtgaacagcaatgaaatttccaaatctgtggctgcatggaaacttcca
tgtacaacaaatgcaactaaaagagaacatcccattttacctgtacctggtgcccgcaac
attcttattacaagtgcattgccttacgtgaataatgtacctcacctgggcaatattatt
ggatcaactctcagtgcagatattttctcaaggtattctcagttacgtggctataactgt
ctttatatctgtggaacagatgaatatggtacagcaacggaaacaaaagctatggaggaa
ggactcacaccacagcagatttgtgataaatacaatgtaatccatgaagaaatttataaa
tggtttaatatttcatttgattattttggtcgcacaacaaccaaattacaaactgagatt
gctcaggacatattttggaagttacataagaaaggttatatctctgaagatactgttgac
caattgaaatgcgaaaaatgtgatcggtttcttgctgataggtttgttgaaggaatctgt
cctctgtgtggttttgatgatgccaggggagatcagtgtgacaaatgtggtaaactaatc
aatgccatagatttagtgaaacctcgttgtaaaacctgctcaaacacacccattgtcaaa
tcttctcgacatctcttcctcgatcttcctaagctggaaccagatttaaagaaacacttg
gatcatgtctttcctaaaggtatttggacaaataatgcaaaagtaatcacaaattcttgg
ttgagagatggtttgaaacctcgctgtataagtcgagatctgaagtggggaacaccagtg
cctttaaaaggtttcactgacaaagtcttttatgtatggtttgatgctccaattggctac
atctccatcacagctaattatactgagaaatgggaacagtggtggaaaaattcatctcag
gtacaaatgtataatttcttaggtaaagacaatgtaccctttcatagtgttatctttcct
gctacattgctgggtgccgacccaaattatactctggttgacagtgtcattgctacagaa
taccttaattatgaagatggaaagttctccaagagtcgtggcgttggtgtgtttggtaac
aatgcaaaagatactggaatacctgctgacatattccgcttttatctggtctacatgcgt
ccagaatctcaggatactgcattttcttgggatgacttccaattgaagaacaattgtgaa
ttacttaacaacataggaaactttattaatcgagccttgatgtttgtcagtaacagtttt
caacagacaattcaggctatggacctaactgagggagatgaaaaactcattgctcaaatt
aacaagcttttgcatcgttatatagaaaacatggaatgtaccaaaatgcgtgatagtctt
cgaatcttgcttgaaatgtccactcttggtaaccagtatatgcagatgcacaaaccttgg
gttttagtgaaagggaccaatgaggagaagcaacgtgctggcacaattgtcagtttatct
agcaatattgcagctctgttatcagtgctactgcaaccctttatgcctcagacaagtgcc
actattcaattacaaatgcaatttcctcctgagaaaaacgtgattcttaataatttttcc
tgttatttatcagctggacataaaattggtaagccaaagccattatttcaaaagttagaa
tatgacttcatccaagaactgaagaaaaagttttcttcaacactgacgacagcagcatca
aacaaaaccaaccaaactgctgcagctgcaacacttggttcagaagcagacgtagaaagt
ttaaaccagttagtaacagaacagggtctcaaagtgcgggaactgaaagccaataaagct
gagaaaagtgtcattgatggtgaagttgctgagctgttagaattaaagcgccaacttgct
ctgaagcaaggagttgatccagcttctcttggtgttgggaataaaaagaaaaacaaaaag
aagtga
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