Octopus bimaculoides (California two-spot octopus): 106872578
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Entry
106872578 CDS
T04127
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106872578
Enzymes [BR:
obi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106872578
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
106872578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
zf-RING_UBOX
zf-TRAF
Beta-prop_IP5PC_F
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
NBCH_WD40
Sina_ZnF
WD40_like
Beta-prop_DCAF4
zf-RING_5
Beta-prop_SPT8
Prok-RING_4
U-box
PKcGMP_CC
Beta-prop_IFT122_1st
zf-RING_6
FlaC_arch
zf-RING_2
DUF16
HMMR_N
Filament
Beta-prop_Nup120_160
DUF641
LRRFIP
DUF1664
DUF1272
Fez1
DUF4515
Motif
Other DBs
NCBI-GeneID:
106872578
NCBI-ProteinID:
XP_052826146
LinkDB
All DBs
Position
8:complement(74696162..74897237)
Genome browser
AA seq
706 aa
AA seq
DB search
MSTRSSKELHNDISTIDGCNTEKNIKAIDAMTVSNSPLLTATKLKLISNEDTLSRESAIA
SYSTSETSDYNGLSQSEATSITSSSSFLAPKLKVTDEDNHSLADPTNAASNSSLFSLSDN
SEYNGGASVLQLPPGHKRTSSNVSTRSLLCDDDDDDIIVFQEEANKKLFCRLCDRVFKDP
VIVSCGHTYCRRCVNNHSDDTCPVDNQKLMIVVANIAVSEQIGELQIHCKYGCKPSEDGS
PHVVDTTKCPVIVKLSNRRVHEDECDYVPVECPNNVGCPSLLKKDLESHLRICNNVMCPH
QKYGCDFIGTQDDLVIHLRTCKLEGMKDFLQRTDEKIAELQFSLNSKEHEISFLRSMLGK
LSERVETLEKTVDMRVDLLEHKQNCIMTEVIDNRRENALVAEEISNINKRLNIGVQLAGY
DDPQRMFKCRGTFVGHQGPVWCLCVFGDYLYSGSSDKTIKVWDTSTSYKCTKTLEGHTGI
VLALCVYGNKLYSGSHDCNIIVWSIDTLEMLKAIESHDNPVCTLASARNKLFSGSLKVIR
VWDAQTHELKKEITGLNHWVRALVATNNHLYSGSYQTIKMWDLETLECIRMLETSGGSVY
SIAVTDHHILCGTYENCIHVWELGTYNQVTTLMGHSGTVYALAVLHTNPGTKVFSASYDR
SLRVWSMDNMICTQTLMRHQGSVACLAVSRGRLFSGAVDSTVKVWQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccggagcagtaaggagcttcacaatgatatcagtacgattgatggatgtaac
actgagaagaacataaaagccattgacgccatgacagtttccaactcacctctcctcaca
gcaacaaaattaaagttgatctcaaatgaagacaccctcagcagggaatcagctatagca
tcatattctacatcagaaaccagtgattataatggcctgtctcagtctgaagccaccagt
attaccagcagtagttcattcctggcccctaaactcaaggtcacagatgaagacaaccac
agcctagcagatcctactaatgcagcatccaacagttcactgttttcattatcagataac
agtgaatacaatgggggtgcctctgtccttcaactacccccaggccacaagcgaacaagc
tctaatgtatctactagatctcttctgtgtgatgatgatgatgatgatataattgttttc
caagaagaagccaataaaaaattattttgtcgcttatgtgatcgagttttcaaagatcca
gtgattgtatcctgtgggcatacgtactgtcgcagatgtgtaaataaccacagtgatgac
acatgtccagtggataaccagaaattaatgattgttgttgccaacattgctgtctctgaa
cagataggggaactccagattcactgtaaatacggttgtaaacccagtgaagatggatcg
ccacatgttgtagacacaacgaaatgtccagtaattgtcaagttgagcaatcgacgtgtt
catgaagatgaatgtgactatgtcccggtagaatgtcccaacaatgttggatgtccatca
ctacttaaaaaggatttggaaagtcatctgcgaatatgtaacaatgtaatgtgtcctcat
caaaaatatggctgtgattttattggaacccaagatgatcttgtgatacatttacgaacc
tgtaaattagaaggaatgaaagactttctgcaacgaacagatgaaaaaattgctgagctt
cagttctccttgaacagtaaggagcatgaaattagtttcttgcgatcaatgttggggaaa
ctgtcagaacgagttgaaacattggagaagacagttgacatgagagtagatctcttggaa
cacaaacagaactgtattatgactgaagtaattgataatcgaagagaaaatgccctggta
gcagaagaaatttctaatattaacaagcgattaaatattggtgtccaattggctggttat
gatgatccacaacgaatgttcaaatgtcgtggaacatttgttgggcatcagggtcctgta
tggtgtctgtgtgtctttggtgattacttgtacagtggatcttcagacaaaacaatcaag
gtgtgggacaccagtactagctataaatgtacaaaaacacttgagggacacacaggtatt
gttcttgctctgtgtgtttatggaaacaaactctacagtgggtcacatgactgtaacatc
attgtctggagtattgatacattagaaatgctaaaagctattgaatcccatgataatcct
gtttgtacactggcttcagcacgaaacaagctcttcagtggatctctcaaagttatacga
gtctgggatgcccaaacacatgaactgaagaaagaaataacaggtttaaaccactgggtt
cgtgccctggtggccaccaacaaccatttgtacagtggatcttatcagacaattaagatg
tgggaccttgaaacactggaatgtattcgaatgcttgaaacttctggtggaagtgtgtac
agtattgcagtgacagaccaccatattttatgtggtacctatgaaaactgtattcatgta
tgggaattagggacctacaaccaggtcactactcttatgggacactcaggcactgtatat
gcattggcagtcttacacactaaccctggtacaaaagttttcagtgcatcctatgatcgt
tcattacgggtgtggagcatggacaatatgatatgtacccaaacattaatgagacatcaa
gggagtgttgcttgtttagctgtgtctagaggtcgattattttcaggagctgtagatagc
actgtaaaggtttggcaataa
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