Octopus bimaculoides (California two-spot octopus): 106872767
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Entry
106872767 CDS
T04127
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106872767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106872767
Spliceosome [BR:
obi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106872767
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_like
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Ge1_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
106872767
NCBI-ProteinID:
XP_014775345
UniProt:
A0A0L8H6D3
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All DBs
Position
1:127480215..127509662
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AA seq
512 aa
AA seq
DB search
MSDDENEVSYYRKDKVVHYGSLEEHQNTDNDSHRKTSSAIEAGIAAGNINISDGAVFEID
DEQSESQAELLAEFERRKRARQIQVSTDDTEVKATLRQLGEPICLFGEGPADRRERLRQL
LAQIGEDTIKKKKIEQEEKKKKREEENITWYHEGSDTLKESRYWLALYSIPRAKARIKLQ
KESKNMPKAQRDAKLHDLHKRIRSVSNECSQIGDNRPLSFCQFSPDSSMLAVASWSGLCK
LWSVPDCSLIRTLRGHNCNVGAIVFHPQATLTMDDAACCLASCGQDGTVKLWNLISDEPV
ADIEGHAPYRVSRLAYHPSGRFLGTCCFDNSWRLWDLEVQEEILHQEGHSKPVYCIAFQK
DGALASTGGLDAFGRVWDLRTGRCVMFLEGHLKSVLDIDFNSDGYHIATGSEDNTARLWD
IRQHKCVYTIPAHTNLVSHVKFQPDHGHYLVTSSYDNTSKIWTHPTWSPMKTLAGHEGKI
MGFDISPDLKYMASSSYDRTFKLWASEMLGSL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaaaatgaagtgtcttactacaggaaagataaagtagtgcattatggg
agtcttgaagaacatcagaatactgacaatgattcacaccgtaaaacctctagtgctata
gaagctggaatagctgctggaaatattaacatatcagatggagcagtgtttgaaattgat
gatgaacaaagtgaaagccaagcagaattactagcagaatttgaacgcaggaaaagggct
cgacagattcaagtatccactgatgacactgaagtaaaagctactttaaggcaactcggg
gagcctatatgtctctttggagaaggtcctgctgatcgtcgagaacgtttgaggcagttg
ttagctcagattggagaagacactataaaaaaaaagaaaattgaacaagaagaaaagaaa
aagaaaagagaagaggaaaatatcacttggtatcatgaaggctcagacacactaaaagaa
tctcgatattggttagcactttattctattccaagagcaaaagcacgcatcaaacttcaa
aaagagtccaaaaacatgcccaaagcacaaagagatgctaaattacatgatcttcataaa
agaattcggtctgtgtctaatgaatgcagtcagataggagataaccgccctctttcattc
tgtcagtttagtccagattcatctatgcttgctgtggcatcttggtctggtttatgtaaa
ctttggtctgtccctgactgcagtttgatccgtactctccgaggccataactgtaatgta
ggagcaattgtgttccatcctcaagcgactcttactatggatgatgcagcttgctgtctg
gcttcttgtggacaagatggcacagtaaaactctggaaccttataagtgatgaaccagta
gctgatattgaaggccatgccccataccgagtgtctagactggcttatcacccttctgga
agattccttggaacctgttgttttgacaattcttggcgactctgggatctggaagtacag
gaagaaattcttcatcaagaaggacacagtaaacctgtctattgcattgctttccagaaa
gatggtgctctagcaagtacaggaggacttgatgcttttggaagagtttgggatcttcgg
actggtcgatgtgtaatgtttcttgaaggacatcttaagtctgtgttagatattgatttc
aacagtgatgggtaccacattgcaactggcagtgaagacaacacagctagattatgggat
atccgtcaacacaaatgtgtctacaccattcctgctcacaccaaccttgtttcacatgtg
aaattccaacctgaccatggtcactacctggtaacttcttcatatgacaatacatctaag
atatggacccaccctacatggtcacctatgaaaacacttgctggtcatgaaggcaaaatc
atgggatttgacatctcaccagatctcaaatatatggcttcatcttcctatgatcggaca
tttaagttgtgggcctctgaaatgctagggagtctctga
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